Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC022513.1-201ENST00000624512 117 ntBASIC1.39□□□□□ -2.19
RIF1Q5UIP0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.39□□□□□ -2.19
RIF1Q5UIP0 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.39□□□□□ -2.19
RIF1Q5UIP0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
RIF1Q5UIP0 AC091152.2-201ENST00000591628 2569 ntBASIC1.39□□□□□ -2.19
RIF1Q5UIP0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.39□□□□□ -2.19
RIF1Q5UIP0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.39□□□□□ -2.19
RIF1Q5UIP0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RIF1Q5UIP0 RPL31P2-201ENST00000413849 377 ntBASIC1.39□□□□□ -2.19
RIF1Q5UIP0 HMGB1P12-201ENST00000438594 598 ntBASIC1.39□□□□□ -2.19
RIF1Q5UIP0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.39□□□□□ -2.19
RIF1Q5UIP0 KATNBL1P4-201ENST00000503545 918 ntBASIC1.39□□□□□ -2.19
RIF1Q5UIP0 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
RIF1Q5UIP0 AC090970.3-201ENST00000612566 866 ntBASIC1.39□□□□□ -2.19
RIF1Q5UIP0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 RNA5SP62-201ENST00000363457 110 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 DHFRP5-201ENST00000406944 564 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 RWDD4P2-201ENST00000426392 563 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AL078601.1-201ENST00000444542 271 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 RWDD4P1-201ENST00000488019 565 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC090453.1-201ENST00000495560 436 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 MTCYBP19-201ENST00000517463 1124 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC023825.1-201ENST00000566704 1030 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 MTCO1P14-201ENST00000441695 1559 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 Z85994.2-201ENST00000434327 452 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC008126.1-201ENST00000549019 480 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.38□□□□□ -2.19
RIF1Q5UIP0 AC103810.8-201ENST00000607347 118 ntBASIC1.38□□□□□ -2.19
RIF1Q5UIP0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.37□□□□□ -2.19
RIF1Q5UIP0 TBCAP3-201ENST00000512475 312 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 RNA5SP121-201ENST00000516537 101 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 SNORA31.15-201ENST00000516771 132 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AC107918.3-201ENST00000533272 382 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AC024614.2-201ENST00000577584 372 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AP001029.3-201ENST00000588063 596 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AL158801.5-201ENST00000623123 465 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AC110774.1-201ENST00000623567 2018 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.37□□□□□ -2.19
RIF1Q5UIP0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RIF1Q5UIP0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RIF1Q5UIP0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 SNORA16.1-201ENST00000364597 132 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.37□□□□□ -2.19
RIF1Q5UIP0 MTCO3P44-201ENST00000510977 541 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 AC034268.2-201ENST00000571784 482 ntBASIC1.37□□□□□ -2.19
RIF1Q5UIP0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC019155.1-201ENST00000382242 574 ntBASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC027673.1-201ENST00000456245 405 ntBASIC1.36□□□□□ -2.19
RIF1Q5UIP0 snoU13.3-201ENST00000459441 104 ntBASIC1.36□□□□□ -2.19
RIF1Q5UIP0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 RNU6-113P-201ENST00000516653 101 ntBASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC092451.2-201ENST00000538746 658 ntBASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC073348.1-201ENST00000623002 331 ntBASIC1.36□□□□□ -2.19
RIF1Q5UIP0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.36□□□□□ -2.19
RIF1Q5UIP0 AC013470.3-201ENST00000420252 1194 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AL358176.2-201ENST00000425769 204 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 CKS1BP5-201ENST00000434172 273 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 IFNWP4-201ENST00000453148 294 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AL583843.1-201ENST00000456070 346 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 RNU6-405P-201ENST00000516637 110 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 RNU6-467P-201ENST00000517027 110 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 SETP7-201ENST00000552169 453 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AC112191.3-201ENST00000604371 277 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 FO624990.1-201ENST00000636373 85 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 RNA5SP239-201ENST00000410218 129 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 RNU2-22P-201ENST00000411266 212 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AC107015.1-201ENST00000466902 747 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.35□□□□□ -2.19
RIF1Q5UIP0 AL137847.3-201ENST00000611521 109 ntBASIC1.35□□□□□ -2.19
RIF1Q5UIP0 SNORD114-27-201ENST00000363766 70 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms