Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AIMP1P2-201ENST00000425294 312 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 MTND6P13-201ENST00000443510 523 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 RN7SKP60-201ENST00000516985 239 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 RNU6-452P-201ENST00000384406 107 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC069234.5-201ENST00000611056 416 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 MIR6078-201ENST00000611069 100 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC092650.2-201ENST00000619984 902 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC009831.4-201ENST00000620744 325 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC012498.1-201ENST00000424037 437 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AP000942.1-201ENST00000463969 747 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 CBX3P5-201ENST00000552017 521 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 MIR5092-201ENST00000583139 88 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC080078.3-201ENST00000605407 463 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 SET-203ENST00000372688 801 ntTSL 2 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 RPL23AP20-201ENST00000447965 421 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 SUMO2P6-201ENST00000505273 288 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC110792.2-201ENST00000510278 224 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 Y_RNA.293-201ENST00000364908 93 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.02□□□□□ -2.25
UBR4Q5T4S7 RNA5SP76-201ENST00000516277 87 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 RNU6-758P-201ENST00000516292 89 ntBASIC1.02□□□□□ -2.25
UBR4Q5T4S7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 MIR601-201ENST00000385256 79 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 CYP3A51P-201ENST00000633513 256 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 MIR6733-201ENST00000635723 61 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 RNU1-75P-201ENST00000347264 129 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 RNU2-20P-201ENST00000410425 191 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC093716.1-201ENST00000435923 377 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AP000852.1-201ENST00000472460 573 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC122134.1-201ENST00000565664 1104 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AL353770.2-201ENST00000620024 78 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 RNU2-6P-201ENST00000411404 190 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AL390334.1-201ENST00000556395 450 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC073387.2-201ENST00000604797 784 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC010487.4-201ENST00000637027 61 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 HMGB1P45-201ENST00000435986 653 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 RPL23AP14-201ENST00000468281 468 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.01□□□□□ -2.25
UBR4Q5T4S7 TXNP6-201ENST00000510190 310 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 OSBPL9P3-201ENST00000534523 595 ntBASIC1.01□□□□□ -2.25
UBR4Q5T4S7 RNF6P1-201ENST00000444889 1784 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1□□□□□ -2.25
UBR4Q5T4S7 UBE2Q2P1-202ENST00000354771 883 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 FCF1P2-201ENST00000415284 583 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1□□□□□ -2.25
UBR4Q5T4S7 AP002345.1-201ENST00000456493 928 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AC244517.12-201ENST00000623581 663 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AC004808.1-201ENST00000627671 721 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
UBR4Q5T4S7 MIR124-3-201ENST00000384866 87 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AC244636.1-201ENST00000421152 228 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1□□□□□ -2.25
UBR4Q5T4S7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1□□□□□ -2.25
UBR4Q5T4S7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1□□□□□ -2.25
UBR4Q5T4S7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1□□□□□ -2.25
UBR4Q5T4S7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
UBR4Q5T4S7 GCNT6-201ENST00000379591 934 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 RPL31P1-201ENST00000398116 372 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 TRAPPC2P5-201ENST00000426293 308 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1□□□□□ -2.25
UBR4Q5T4S7 RNU6-113P-201ENST00000516653 101 ntBASIC1□□□□□ -2.25
UBR4Q5T4S7 CBX3P8-201ENST00000532412 525 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms