Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 BTF3P5-201ENST00000457252 467 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 RPL31P50-201ENST00000471002 296 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 HMGB1P36-201ENST00000487709 576 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 RPL37P25-201ENST00000507308 276 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 TMEM248P1-201ENST00000510579 951 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC016957.1-201ENST00000534895 309 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC015917.1-201ENST00000579654 510 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 MIR4307-201ENST00000582802 84 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC010928.3-201ENST00000587712 541 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC103710.3-201ENST00000608157 948 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AL603839.4-201ENST00000624658 1005 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC068137.3-201ENST00000639191 341 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC073869.6-201ENST00000640656 341 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AL157700.1-201ENST00000561973 1432 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 RNU6-343P-201ENST00000364709 104 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 RNU6-761P-201ENST00000384148 107 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 SNORA40.3-201ENST00000390964 122 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AL138878.1-201ENST00000405131 347 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 HMGN1P24-201ENST00000412282 298 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AL356968.1-201ENST00000416622 474 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 NUP35P2-201ENST00000416748 943 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 C8orf59P1-201ENST00000429930 303 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC005297.2-201ENST00000450430 606 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 RPS4XP2-201ENST00000458402 793 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 SNRPGP3-201ENST00000469405 227 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 RPL9P33-201ENST00000484311 566 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC090453.1-201ENST00000495560 436 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 MTND4LP18-201ENST00000526864 291 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC068587.4-201ENST00000533893 186 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 RNVU1-4-201ENST00000612985 164 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AL356321.1-201ENST00000621360 228 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 AC017071.1-201ENST00000564407 2204 ntBASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TTC39AQ5SRH9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC130650.2-201ENST00000618736 2403 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 ELL2P4-201ENST00000446870 1376 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 RPL23AP57-201ENST00000332361 466 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 U3.19-201ENST00000390893 196 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AL031679.1-201ENST00000400616 525 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 Z98941.1-201ENST00000407764 100 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC063979.1-201ENST00000415539 377 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 EI24P1-201ENST00000416584 867 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC127526.1-201ENST00000417526 366 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 FNDC3CP-201ENST00000420795 1155 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AL035410.1-201ENST00000427409 427 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 RPL23AP82-202ENST00000427528 469 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC091862.1-201ENST00000438016 1100 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 AC002381.1-201ENST00000447049 280 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 ARPC3P5-201ENST00000448802 534 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 PAXBP1P1-201ENST00000449315 447 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 USP9YP12-201ENST00000450481 570 ntBASIC4.05□□□□□ -1.76
TTC39AQ5SRH9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms