Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC073464.1-201ENST00000429823 534 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 RPS17P13-201ENST00000448974 407 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC010655.1-201ENST00000449336 292 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AMD1P1-201ENST00000457220 922 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 RPL38P1-201ENST00000460914 211 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC008628.2-201ENST00000502605 298 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC108078.1-201ENST00000508073 725 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC026726.1-201ENST00000512859 601 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC006064.5-201ENST00000541782 248 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 SETP2-201ENST00000553886 926 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 OR4T1P-201ENST00000554933 911 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL360157.1-201ENST00000565962 87 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC022655.2-201ENST00000577280 318 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 MIR3146-201ENST00000580367 79 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 XIAPP1-201ENST00000603162 600 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC008945.2-201ENST00000606056 604 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 uc_338.32-201ENST00000615087 172 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC104260.1-201ENST00000616660 539 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC002553.4-201ENST00000616896 331 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL354685.2-201ENST00000448218 1447 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC067945.1-201ENST00000342609 618 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 RNA5SP124-201ENST00000362739 110 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 Y_RNA.813-201ENST00000364639 102 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 SNORA73.2-201ENST00000364946 201 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 RNU6-282P-201ENST00000365357 103 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 MTCO3P40-201ENST00000392516 676 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 FGF7P8-201ENST00000402994 292 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC093578.1-201ENST00000415219 368 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AL139413.1-201ENST00000421309 217 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 ELOCP14-201ENST00000428070 331 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 ELOCP7-201ENST00000439968 331 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 USP9YP15-201ENST00000442391 422 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 DPPA3P1-201ENST00000448050 469 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 SNORD108-201ENST00000459332 71 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC114967.1-201ENST00000504890 259 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC009646.1-201ENST00000510455 318 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 RNU6-1220P-201ENST00000517126 108 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 OR5AQ1P-201ENST00000527596 927 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC104383.1-201ENST00000530297 370 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AK6P1-201ENST00000540219 478 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC099489.2-201ENST00000574976 260 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 MIR4644-201ENST00000579929 84 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 NRBF2P1-201ENST00000587407 859 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AL158211.4-201ENST00000606988 584 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AL161734.1-201ENST00000609720 557 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AL592295.2-201ENST00000612578 206 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AP005264.7-201ENST00000625003 745 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 AC244517.1-201ENST00000606030 2086 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC44A4Q53GD3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC44A4Q53GD3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms