Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RLIMP1-201ENST00000339626 1680 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC38Q502W7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 GNG5P1-201ENST00000255500 204 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 RNY3P13-201ENST00000365542 102 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 MIR184-201ENST00000384962 84 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 HSPE1P8-201ENST00000406997 288 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 MIR1193-201ENST00000408109 78 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 RNU6-248P-201ENST00000410720 107 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AL356095.1-201ENST00000417217 199 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC016907.1-201ENST00000419483 435 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC019097.1-201ENST00000424783 735 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AL691449.1-201ENST00000426570 421 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AL589872.1-201ENST00000426602 288 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 RPL7L1P10-201ENST00000427790 463 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 RPL7P19-201ENST00000469948 618 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC022447.1-201ENST00000515358 464 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 RNA5SP179-201ENST00000517284 121 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC093331.1-201ENST00000521474 169 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AP001804.3-201ENST00000525146 880 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC090877.1-201ENST00000561418 344 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC137800.2-201ENST00000574375 120 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 MTCYBP33-201ENST00000575007 1130 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC040904.1-201ENST00000590850 223 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC091167.4-201ENST00000605079 184 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC091304.9-201ENST00000612091 226 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 SNHG22-203ENST00000617833 660 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC009509.4-201ENST00000619202 509 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 AC091905.1-201ENST00000624400 311 ntBASIC3.98□□□□□ -1.77
CCDC38Q502W7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC38Q502W7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC38Q502W7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC002546.1-201ENST00000588041 2504 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC38Q502W7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 SNORA75-201ENST00000384158 137 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AL022722.2-201ENST00000402519 180 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC38Q502W7 RPL31P12-201ENST00000422587 358 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 USP12PX-201ENST00000432383 1057 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 CFTRP1-201ENST00000456646 183 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 RPS23P3-201ENST00000470993 430 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC078785.3-201ENST00000476607 425 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 TRBV12-2-201ENST00000489763 344 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 UBE2CP3-201ENST00000502715 450 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 NDUFB4P2-201ENST00000509515 391 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC079140.3-201ENST00000511111 550 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC38Q502W7 ARL2BPP6-201ENST00000512757 439 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 RN7SKP60-201ENST00000516985 239 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 RNU2-46P-201ENST00000517038 113 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AP002963.1-201ENST00000530590 184 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 DUXAP4-201ENST00000603046 613 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC011939.3-201ENST00000613686 466 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC004696.1-201ENST00000614345 607 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 AL136313.1-201ENST00000624804 202 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 PISRT1-201ENST00000626175 531 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 PWAR6-201ENST00000552334 4618 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC38Q502W7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms