Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 SNORD115.1-201ENST00000391109 76 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 C1DP2-201ENST00000418167 426 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 YPEL5P1-201ENST00000419731 367 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC024082.2-201ENST00000434771 238 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC073614.1-201ENST00000438690 650 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC083863.1-201ENST00000438811 231 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 HMGB1P37-201ENST00000439613 609 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC112653.1-201ENST00000443851 386 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 RPL9P6-201ENST00000492764 598 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 RNU6-430P-201ENST00000517078 107 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AP003467.2-201ENST00000520175 319 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AL163153.1-201ENST00000554223 283 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 TPRKBP2-201ENST00000565969 475 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AL161729.4-201ENST00000604650 476 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC002550.2-201ENST00000621246 394 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC103858.2-201ENST00000621471 543 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC138649.3-201ENST00000622154 254 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 OR5H6-203ENST00000642105 978 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 AC092447.10-201ENST00000620607 1652 ntBASIC4.47□□□□□ -1.69
LONRF3Q496Y0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LONRF3Q496Y0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LONRF3Q496Y0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 RPS3AP36-201ENST00000398190 775 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 RPS20P2-201ENST00000402520 389 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 MTND1P23-201ENST00000416931 372 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 UBE2V1P13-201ENST00000436983 439 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 RPL22P17-201ENST00000438729 315 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 FAM103A2P-201ENST00000444122 354 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 GAPDHP17-201ENST00000449858 1001 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC099563.1-201ENST00000456086 418 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 RPL21P129-201ENST00000491732 478 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC034222.1-201ENST00000494052 532 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC091133.4-201ENST00000511142 308 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AP003122.4-201ENST00000530980 758 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 MED28P6-201ENST00000558776 231 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AL157394.1-201ENST00000562983 1224 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AP001429.1-201ENST00000602568 530 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AF250324.2-201ENST00000608299 610 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 LINC02471-203ENST00000641941 4752 ntBASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
LONRF3Q496Y0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 OR4G2P-201ENST00000328113 903 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 SNORA62.3-201ENST00000365110 153 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 Y_RNA.548-201ENST00000384656 105 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 MTND1P21-201ENST00000412991 285 ntBASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.45□□□□□ -1.7
LONRF3Q496Y0 AF228730.2-201ENST00000438784 848 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms