Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 RPS27AP13-201ENST00000498403 237 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC006499.6-201ENST00000511169 607 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 RNA5SP49-201ENST00000516450 115 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 TVP23BP1-201ENST00000557500 617 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC025678.1-201ENST00000567861 338 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 RN7SL600P-201ENST00000581811 299 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC004696.1-201ENST00000614345 607 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC018529.3-201ENST00000624212 2254 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 MTND5P17-201ENST00000418405 1603 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RNU6-50P-201ENST00000362356 103 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RNY4P14-201ENST00000363656 96 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RNA5SP283-201ENST00000365604 119 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 Y_RNA.450-201ENST00000384198 113 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RNU6-606P-201ENST00000384721 111 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RN7SKP285-201ENST00000410137 318 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RNU6-628P-201ENST00000410675 107 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 GAPDHP27-201ENST00000447427 1020 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 VN1R17P-201ENST00000472048 1090 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 HSPD1P15-201ENST00000505573 1122 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC116562.3-201ENST00000506136 177 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RNA5SP468-201ENST00000516782 93 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC068587.5-201ENST00000528506 175 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 RPL23AP97-201ENST00000568955 471 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 MIR3690-201ENST00000580266 75 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 MIR4801-201ENST00000582704 82 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC025449.1-201ENST00000603896 529 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AL713922.2-201ENST00000619384 716 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC112484.5-201ENST00000624189 228 ntBASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC144BQ3MJ40 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 Y_RNA.22-201ENST00000362492 102 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 RNU4-48P-201ENST00000365559 182 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 Y_RNA.409-201ENST00000383990 98 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 MIR1-2-201ENST00000384961 85 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 RPL23AP48-201ENST00000406913 488 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 RPS23P10-201ENST00000416185 486 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC004552.1-201ENST00000419089 348 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 FGF7P3-201ENST00000454645 303 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 RPS26P3-201ENST00000470205 348 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC090543.2-201ENST00000483963 348 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC004057.1-201ENST00000485827 348 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC026427.2-201ENST00000506228 536 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 RNU6-718P-201ENST00000516166 105 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 SNORD27.1-201ENST00000516319 72 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC109635.3-201ENST00000529536 185 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 SNORA59B-202ENST00000578183 701 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC006130.2-201ENST00000586202 326 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 MIR6867-201ENST00000610636 67 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC007546.2-201ENST00000623996 360 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AC034229.5-201ENST00000624258 185 ntBASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC144BQ3MJ40 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms