Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 EOGT-210ENST00000615922 1931 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 SCARNA15-201ENST00000607520 4325 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AP000560.1-201ENST00000624150 1937 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 RNU6-960P-201ENST00000364056 120 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.586-201ENST00000391146 98 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AL023807.1-201ENST00000407932 359 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 SNORA11.1-201ENST00000408133 129 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 RN7SKP100-201ENST00000411258 284 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 RPS27AP12-201ENST00000429552 465 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AL162725.1-201ENST00000435405 301 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 KRT8P51-201ENST00000438938 274 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 RNU7-59P-201ENST00000459101 61 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC087190.1-201ENST00000484462 480 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC107032.1-201ENST00000485945 480 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC020593.1-201ENST00000507399 299 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 PDCD5P2-201ENST00000507570 312 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC008958.1-201ENST00000511047 682 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 NDUFB4P9-201ENST00000511646 388 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC006427.1-201ENST00000514359 712 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC136932.1-201ENST00000574771 208 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AL049794.2-201ENST00000616301 365 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AL136313.1-201ENST00000624804 202 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 MTND1P7-201ENST00000632801 297 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 TTC41P-205ENST00000551270 3963 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 RBBP8P1-201ENST00000449447 1844 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 LINC02555-201ENST00000563933 1951 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC097063.1-201ENST00000426714 1797 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 AC114774.1-201ENST00000507410 1770 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 GABPAP-201ENST00000419271 1356 ntBASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RSPO4Q2I0M5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 Z75746.1-201ENST00000440243 2080 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 RN7SKP145-201ENST00000363291 303 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 RNU1-146P-201ENST00000364015 165 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 RNU6-1325P-201ENST00000364905 105 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 SNORA66-201ENST00000384792 133 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 SNORA69.1-201ENST00000390904 137 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.581-201ENST00000391017 97 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 DBIP1-201ENST00000401435 260 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 RN7SKP114-201ENST00000410327 279 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 RNF10P1-201ENST00000418589 369 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AC073410.1-201ENST00000435125 589 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AC018437.1-201ENST00000492214 406 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 RPL23AP55-201ENST00000498163 452 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 RNU6-1092P-201ENST00000516955 87 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.719-201ENST00000517156 106 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AC027288.2-201ENST00000553028 243 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AMZ2P1-203ENST00000565833 850 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms