| PAX8 | Q06710 | RNU2-58P-201 | ENST00000516403 | 183 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | LINC02398-201 | ENST00000536666 | 431 nt | TSL 3 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL133166.1-202 | ENST00000550975 | 565 nt | TSL 4 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RPL21P5-201 | ENST00000554662 | 472 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL355922.1-201 | ENST00000555624 | 337 nt | TSL 3 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC245505.1-201 | ENST00000556398 | 224 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC009063.1-201 | ENST00000563342 | 702 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC007495.1-203 | ENST00000569025 | 888 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC010546.1-201 | ENST00000569391 | 485 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL669831.4-202 | ENST00000590817 | 238 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RNASEH2B-AS1-206 | ENST00000601286 | 657 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | BRDTP1-201 | ENST00000605735 | 677 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | DPY19L1-208 | ENST00000612226 | 607 nt | TSL 1 (best) BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC138393.3-201 | ENST00000618397 | 573 nt | TSL 3 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC018755.4-201 | ENST00000619715 | 454 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | CAPZA2-214 | ENST00000628758 | 525 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC073172.1-201 | ENST00000636967 | 851 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MTND5P3-201 | ENST00000438536 | 1800 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AGL-205 | ENST00000370163 | 7166 nt | APPRIS P1 TSL 1 (best) BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MFSD8-236 | ENST00000641509 | 4050 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | WDR72-201 | ENST00000360509 | 5887 nt | APPRIS P2 TSL 1 (best) BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MTCO1P24-201 | ENST00000515438 | 1558 nt | BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | KIF15-203 | ENST00000425755 | 3460 nt | TSL 5 BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | PGGT1B-203 | ENST00000419445 | 9545 nt | APPRIS P1 TSL 1 (best) BASIC | 2.95 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | PKN2-AS1-202 | ENST00000458097 | 3542 nt | TSL 2 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | TDRD1-202 | ENST00000369280 | 4062 nt | APPRIS ALT2 TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC092125.1-201 | ENST00000562568 | 1995 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | FIGNL1-201 | ENST00000356889 | 3471 nt | APPRIS P1 TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MACC1-205 | ENST00000589011 | 2686 nt | APPRIS P1 TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | QKI-202 | ENST00000361195 | 1063 nt | TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RNY4P24-201 | ENST00000362735 | 96 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RNA5SP50-201 | ENST00000363731 | 107 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RNA5SP387-201 | ENST00000364226 | 106 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | SNORD6-201 | ENST00000365444 | 73 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | OR5V1-215 | ENST00000377154 | 1266 nt | APPRIS P1 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | SNORD51-201 | ENST00000384320 | 80 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RNU6-1215P-201 | ENST00000384441 | 102 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RPL7P25-201 | ENST00000404151 | 721 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RNU4-78P-201 | ENST00000410940 | 126 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC002456.1-201 | ENST00000415965 | 317 nt | TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | BX842559.1-201 | ENST00000419615 | 532 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL160272.1-201 | ENST00000421509 | 521 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | ABCC5-AS1-201 | ENST00000422946 | 469 nt | TSL 2 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RPS3AP44-201 | ENST00000425466 | 790 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | C21orf91-OT1-202 | ENST00000430815 | 717 nt | TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MTND6P13-201 | ENST00000443510 | 523 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC131571.1-202 | ENST00000454509 | 598 nt | TSL 4 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | LINC00374-201 | ENST00000454780 | 800 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MTCO3P20-201 | ENST00000454926 | 688 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | LINC01546-201 | ENST00000457435 | 674 nt | TSL 2 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | snoU13.8-201 | ENST00000458890 | 104 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | snoU109.1-201 | ENST00000459339 | 135 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | SNRPGP3-201 | ENST00000469405 | 227 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | TMED11P-201 | ENST00000479478 | 690 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | LINC01327-201 | ENST00000498413 | 535 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC108062.1-201 | ENST00000505133 | 637 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC027613.1-201 | ENST00000508414 | 457 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC005921.1-201 | ENST00000510589 | 286 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC010451.3-201 | ENST00000511721 | 444 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC063919.1-201 | ENST00000514281 | 254 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | EGFLAM-AS2-202 | ENST00000514377 | 539 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RN7SKP298-201 | ENST00000515950 | 94 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RN7SKP116-201 | ENST00000516902 | 319 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC018437.2-201 | ENST00000517369 | 389 nt | TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC105031.3-201 | ENST00000524359 | 616 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AP003497.1-201 | ENST00000528472 | 562 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | OR4P1P-201 | ENST00000530808 | 1136 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC010183.2-202 | ENST00000546791 | 382 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | EEF1B2P4-201 | ENST00000551398 | 348 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL359233.1-201 | ENST00000554029 | 364 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MEG8-218 | ENST00000556720 | 456 nt | TSL 3 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL157394.1-201 | ENST00000562983 | 1224 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC107954.1-201 | ENST00000565906 | 727 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC137800.2-201 | ENST00000574375 | 120 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL513324.1-201 | ENST00000575236 | 632 nt | TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | UBE2L4-201 | ENST00000587688 | 464 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | HMGN1P30-201 | ENST00000589286 | 268 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | ZEB2-AS1-204 | ENST00000595109 | 855 nt | TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC090578.1-201 | ENST00000604955 | 591 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC007179.3-201 | ENST00000604976 | 235 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC103710.3-201 | ENST00000608157 | 948 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | TMBIM4-213 | ENST00000613669 | 851 nt | TSL 5 BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AP001506.1-201 | ENST00000615444 | 211 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC108479.2-201 | ENST00000617314 | 601 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AL158801.5-201 | ENST00000623123 | 465 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AP003355.3-201 | ENST00000623465 | 114 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | TUSC7-203 | ENST00000477539 | 2415 nt | TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | MTND5P33-201 | ENST00000571250 | 1450 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | TMEM71-202 | ENST00000377901 | 1861 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | PRRG1-202 | ENST00000449135 | 4481 nt | APPRIS P1 TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | PRO1804-201 | ENST00000623780 | 2050 nt | BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | ZNF483-201 | ENST00000309235 | 3655 nt | APPRIS P1 TSL 1 (best) BASIC | 2.94 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | CSNK1G3-203 | ENST00000361991 | 2424 nt | APPRIS P3 TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RAD17-206 | ENST00000358030 | 2648 nt | TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | ATXN3-248 | ENST00000558190 | 26812 nt | APPRIS P1 TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | AC079160.1-202 | ENST00000508406 | 2795 nt | TSL 5 BASIC | 2.93 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | LRMP-221 | ENST00000636465 | 4540 nt | APPRIS ALT2 TSL 5 BASIC | 2.93 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | SNORA31-201 | ENST00000362607 | 130 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | RNU6-97P-201 | ENST00000363387 | 104 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| PAX8 | Q06710 | Y_RNA.516-201 | ENST00000384541 | 124 nt | BASIC | 2.93 | □□□□□ -1.94 | | |