Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Y_RNA.160-201ENST00000363677 92 ntBASIC3.6□□□□□ -1.83
LTBQ06643 RNU6-730P-201ENST00000383954 104 ntBASIC3.6□□□□□ -1.83
LTBQ06643 RNU6-1226P-201ENST00000384317 107 ntBASIC3.6□□□□□ -1.83
LTBQ06643 RN7SKP285-201ENST00000410137 318 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AL359704.1-201ENST00000411586 781 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC127391.1-201ENST00000411737 98 ntBASIC3.6□□□□□ -1.83
LTBQ06643 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 AC016831.2-201ENST00000417179 352 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC012498.1-201ENST00000424037 437 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 KCTD9P3-201ENST00000434597 1169 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.6□□□□□ -1.83
LTBQ06643 AC105402.2-201ENST00000438503 358 ntBASIC3.6□□□□□ -1.83
LTBQ06643 MTND4LP16-201ENST00000440828 295 ntBASIC3.6□□□□□ -1.83
LTBQ06643 HSPE1P28-201ENST00000443139 211 ntBASIC3.6□□□□□ -1.83
LTBQ06643 RPS26P56-201ENST00000444468 240 ntBASIC3.6□□□□□ -1.83
LTBQ06643 NDUFS5P3-201ENST00000450668 321 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC104073.1-201ENST00000451988 151 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AP000852.1-201ENST00000472460 573 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC087879.1-201ENST00000474343 374 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC104563.1-201ENST00000476147 376 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AP001025.2-201ENST00000490908 477 ntBASIC3.6□□□□□ -1.83
LTBQ06643 RNF138P1-201ENST00000502765 546 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.6□□□□□ -1.83
LTBQ06643 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 AL117336.2-201ENST00000602435 335 ntBASIC3.6□□□□□ -1.83
LTBQ06643 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.6□□□□□ -1.83
LTBQ06643 AC012507.3-201ENST00000603556 477 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AL035413.2-201ENST00000604801 525 ntBASIC3.6□□□□□ -1.83
LTBQ06643 OR10AB1P-201ENST00000609613 938 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AL133173.2-201ENST00000614270 90 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AL121772.2-201ENST00000614331 297 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 AC010149.2-201ENST00000637608 315 ntBASIC3.6□□□□□ -1.83
LTBQ06643 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.6□□□□□ -1.83
LTBQ06643 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LTBQ06643 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 AC130650.2-201ENST00000618736 2403 ntBASIC3.6□□□□□ -1.83
LTBQ06643 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.6□□□□□ -1.83
LTBQ06643 AC027287.1-201ENST00000553115 1453 ntBASIC3.6□□□□□ -1.83
LTBQ06643 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
LTBQ06643 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LTBQ06643 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LTBQ06643 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LTBQ06643 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LTBQ06643 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 Y_RNA.11-201ENST00000362375 109 ntBASIC3.59□□□□□ -1.83
LTBQ06643 RNU5E-1-201ENST00000362477 120 ntBASIC3.59□□□□□ -1.83
LTBQ06643 RNA5SP399-201ENST00000364003 117 ntBASIC3.59□□□□□ -1.83
LTBQ06643 Y_RNA.381-201ENST00000365666 102 ntBASIC3.59□□□□□ -1.83
LTBQ06643 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LTBQ06643 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LTBQ06643 RNU6-877P-201ENST00000383868 107 ntBASIC3.59□□□□□ -1.83
LTBQ06643 ENSAP1-201ENST00000392855 326 ntBASIC3.59□□□□□ -1.83
LTBQ06643 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 RAC1P3-201ENST00000416129 580 ntBASIC3.59□□□□□ -1.83
LTBQ06643 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 AL353777.1-201ENST00000425552 326 ntBASIC3.59□□□□□ -1.83
LTBQ06643 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.59□□□□□ -1.83
LTBQ06643 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 MTND1P11-201ENST00000456661 876 ntBASIC3.59□□□□□ -1.83
LTBQ06643 HMGN1P12-201ENST00000499125 195 ntBASIC3.59□□□□□ -1.83
LTBQ06643 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LTBQ06643 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 AC018710.1-201ENST00000506509 158 ntBASIC3.59□□□□□ -1.83
LTBQ06643 AC025465.4-201ENST00000513422 638 ntBASIC3.59□□□□□ -1.83
LTBQ06643 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 AL512310.1-201ENST00000548639 172 ntBASIC3.59□□□□□ -1.83
LTBQ06643 AC009101.1-201ENST00000568135 242 ntBASIC3.59□□□□□ -1.83
LTBQ06643 MIR3118-1-201ENST00000581787 76 ntBASIC3.59□□□□□ -1.83
LTBQ06643 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.59□□□□□ -1.83
LTBQ06643 UBE2V2P2-201ENST00000587677 504 ntBASIC3.59□□□□□ -1.83
LTBQ06643 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.59□□□□□ -1.83
LTBQ06643 AP003117.2-201ENST00000606010 545 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms