Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.43□□□□□ -1.7
IRF9Q00978 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
IRF9Q00978 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
IRF9Q00978 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
IRF9Q00978 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
IRF9Q00978 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
IRF9Q00978 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
IRF9Q00978 RNU4-44P-201ENST00000363050 141 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 SNORA71.2-201ENST00000364941 134 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 Y_RNA.530-201ENST00000384587 101 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
IRF9Q00978 RNU6-550P-201ENST00000391057 101 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.43□□□□□ -1.7
IRF9Q00978 RPL30P2-201ENST00000414021 291 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 RPL21P112-201ENST00000434403 463 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 KCTD9P3-201ENST00000434597 1169 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AC006466.1-201ENST00000438721 289 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AC007677.1-201ENST00000445757 515 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.43□□□□□ -1.7
IRF9Q00978 RNU6-1208P-201ENST00000459588 107 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 RPS3AP41-201ENST00000462701 778 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 Y_RNA.654-201ENST00000497848 106 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 CCDC34P1-201ENST00000507441 517 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 RNU6-685P-201ENST00000517088 95 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 HPRT1P3-201ENST00000539521 576 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.43□□□□□ -1.7
IRF9Q00978 EDDM3DP-201ENST00000554692 434 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 OR4H12P-201ENST00000556269 907 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 HMGB3P26-201ENST00000560051 582 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.43□□□□□ -1.7
IRF9Q00978 AC006116.10-201ENST00000591836 581 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AL022345.1-201ENST00000607292 135 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AC020634.1-201ENST00000608701 549 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 AC104237.2-201ENST00000612456 443 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.43□□□□□ -1.7
IRF9Q00978 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
IRF9Q00978 OR14L1P-202ENST00000641545 3009 ntBASIC4.43□□□□□ -1.7
IRF9Q00978 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
IRF9Q00978 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
IRF9Q00978 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
IRF9Q00978 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
IRF9Q00978 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
IRF9Q00978 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
IRF9Q00978 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
IRF9Q00978 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.42□□□□□ -1.7
IRF9Q00978 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
IRF9Q00978 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
IRF9Q00978 RNU1-94P-201ENST00000362627 173 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 RNA5SP307-201ENST00000362863 116 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 Y_RNA.67-201ENST00000362870 100 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 Y_RNA.378-201ENST00000365652 113 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 AL356967.1-201ENST00000406305 431 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 AC119751.6-201ENST00000416712 186 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.42□□□□□ -1.7
IRF9Q00978 PRPS1P1-201ENST00000445305 876 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC012671.1-201ENST00000451912 203 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC022795.1-201ENST00000473808 480 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 RBBP4P6-201ENST00000508098 202 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC134698.5-201ENST00000519444 336 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.42□□□□□ -1.7
IRF9Q00978 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.42□□□□□ -1.7
IRF9Q00978 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.42□□□□□ -1.7
IRF9Q00978 MIR4737-201ENST00000583979 81 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC008521.1-201ENST00000587471 187 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 FAM25E-202ENST00000608562 189 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC012409.4-201ENST00000612923 249 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC007998.5-201ENST00000622938 237 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 AC091953.3-201ENST00000623220 236 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.42□□□□□ -1.7
IRF9Q00978 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
IRF9Q00978 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
IRF9Q00978 MAPK10-286ENST00000641208 8747 ntBASIC4.42□□□□□ -1.7
IRF9Q00978 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.42□□□□□ -1.7
IRF9Q00978 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.41□□□□□ -1.7
IRF9Q00978 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.41□□□□□ -1.7
IRF9Q00978 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
IRF9Q00978 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
IRF9Q00978 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
IRF9Q00978 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
IRF9Q00978 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.41□□□□□ -1.7
IRF9Q00978 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
IRF9Q00978 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.41□□□□□ -1.7
IRF9Q00978 FRG1CP-201ENST00000358464 769 ntBASIC4.41□□□□□ -1.7
IRF9Q00978 RPS4XP9-201ENST00000405151 780 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms