Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC092634.6-201ENST00000418558 192 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNA1P78396 MTCO3P1-205ENST00000422088 832 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 AC129850.1-201ENST00000436203 508 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 GAPDHP27-201ENST00000447427 1020 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNA1P78396 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.98□□□□□ -1.93
CCNA1P78396 AP004217.1-201ENST00000480579 346 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.98□□□□□ -1.93
CCNA1P78396 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNA1P78396 COX7A2P2-201ENST00000505291 250 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNA1P78396 SEM1P1-201ENST00000506694 209 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 AC109329.2-201ENST00000519658 482 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 OR5AK1P-201ENST00000524837 922 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.98□□□□□ -1.93
CCNA1P78396 MIR4789-201ENST00000577469 82 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 MIR4666A-201ENST00000580160 79 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNA1P78396 AP001542.2-201ENST00000593141 364 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 DNAJC19P3-201ENST00000594491 331 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CCNA1P78396 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCNA1P78396 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 RNU6-1066P-201ENST00000363573 105 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 RNU6-609P-201ENST00000365459 107 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.97□□□□□ -1.93
CCNA1P78396 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 RNU6-193P-201ENST00000410977 107 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AC009963.1-201ENST00000417265 157 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.97□□□□□ -1.93
CCNA1P78396 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.97□□□□□ -1.93
CCNA1P78396 AL356867.1-201ENST00000429623 299 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.97□□□□□ -1.93
CCNA1P78396 AC092573.2-201ENST00000434546 243 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 ARPC3P1-201ENST00000437218 533 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 RPL23AP74-201ENST00000437246 471 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 RNU6-420P-201ENST00000458780 107 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.97□□□□□ -1.93
CCNA1P78396 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.97□□□□□ -1.93
CCNA1P78396 RN7SKP24-201ENST00000515888 284 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 RNU5A-7P-201ENST00000515979 116 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.97□□□□□ -1.93
CCNA1P78396 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AC090502.2-201ENST00000549267 280 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
CCNA1P78396 AC090695.1-201ENST00000561269 1222 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 ACTR3BP3-201ENST00000565577 979 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 BNIP3P24-201ENST00000593398 557 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AL136363.1-201ENST00000605349 337 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AC092954.1-201ENST00000609121 445 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AC080188.3-201ENST00000624842 748 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 AC084035.1-201ENST00000634543 607 ntBASIC2.97□□□□□ -1.93
CCNA1P78396 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCNA1P78396 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.96□□□□□ -1.94
CCNA1P78396 HMGB1P5-201ENST00000255320 642 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 RNU6-492P-201ENST00000363035 104 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 SNORA51.4-201ENST00000364993 124 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 RNU1-109P-201ENST00000383960 147 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 U6.112-201ENST00000384129 70 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 MIR627-201ENST00000384979 97 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 RNU4-53P-201ENST00000410828 140 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNA1P78396 AL135786.1-201ENST00000415892 214 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 BX664727.1-201ENST00000416024 466 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNA1P78396 PSMA6P3-201ENST00000428242 164 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AL512637.2-201ENST00000431287 1256 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNA1P78396 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNA1P78396 PNPLA4P1-201ENST00000458328 305 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 RPL31P60-201ENST00000478450 367 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNA1P78396 AC121161.1-201ENST00000510606 652 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCNA1P78396 RNA5SP320-201ENST00000516263 124 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 CASP1P1-201ENST00000526345 212 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CCNA1P78396 AC243972.3-201ENST00000539655 198 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNA1P78396 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.96□□□□□ -1.94
CCNA1P78396 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.96□□□□□ -1.94
CCNA1P78396 AC105224.1-201ENST00000587055 421 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AC083760.1-201ENST00000589621 670 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AL035411.2-201ENST00000604022 421 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 AL627309.6-201ENST00000606857 840 ntBASIC2.96□□□□□ -1.94
CCNA1P78396 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
CCNA1P78396 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CCNA1P78396 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCNA1P78396 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.96□□□□□ -1.94
CCNA1P78396 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
CCNA1P78396 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCNA1P78396 AC096533.1-201ENST00000411645 353 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.95□□□□□ -1.94
CCNA1P78396 AC090774.1-201ENST00000435925 246 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 AC092393.1-201ENST00000439625 742 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms