Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC009314.1-201ENST00000603871 304 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 AP000676.4-201ENST00000624659 623 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.62□□□□□ -2.15
ABCA4P78363 AC022336.2-201ENST00000568966 2538 ntBASIC1.62□□□□□ -2.15
ABCA4P78363 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA4P78363 RNU4-31P-201ENST00000384211 141 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.61□□□□□ -2.15
ABCA4P78363 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.61□□□□□ -2.15
ABCA4P78363 AL392003.1-201ENST00000434394 243 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 AC009961.3-201ENST00000449832 765 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 SSXP4-201ENST00000451349 245 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.61□□□□□ -2.15
ABCA4P78363 RBM43P1-201ENST00000476891 1081 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 RPS29P11-201ENST00000496507 171 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.61□□□□□ -2.15
ABCA4P78363 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.61□□□□□ -2.15
ABCA4P78363 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.61□□□□□ -2.15
ABCA4P78363 AC004923.2-201ENST00000529649 369 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 MIR6504-201ENST00000613520 61 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.61□□□□□ -2.15
ABCA4P78363 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.61□□□□□ -2.15
ABCA4P78363 ZNF271P-202ENST00000465539 1970 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 RNA5SP325-201ENST00000363756 130 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ABCA4P78363 RNU6-185P-201ENST00000384421 107 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.61□□□□□ -2.15
ABCA4P78363 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.61□□□□□ -2.15
ABCA4P78363 RPS24P6-201ENST00000452670 400 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.61□□□□□ -2.15
ABCA4P78363 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.61□□□□□ -2.15
ABCA4P78363 AL354943.1-201ENST00000572103 781 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 AC068831.7-201ENST00000616954 363 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 AL137003.2-201ENST00000606924 2538 ntBASIC1.61□□□□□ -2.15
ABCA4P78363 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
ABCA4P78363 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ABCA4P78363 DEFB109C-201ENST00000382575 264 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 DEFB109B-201ENST00000382656 264 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.6□□□□□ -2.15
ABCA4P78363 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA4P78363 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ABCA4P78363 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.6□□□□□ -2.15
ABCA4P78363 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA4P78363 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA4P78363 RPL21P134-201ENST00000453468 483 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 RNU7-95P-201ENST00000459222 64 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 SNRPGP16-201ENST00000533275 226 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.6□□□□□ -2.15
ABCA4P78363 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA4P78363 AL049779.4-201ENST00000604500 156 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AL360085.1-201ENST00000604713 532 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.6□□□□□ -2.15
ABCA4P78363 AL049737.1-201ENST00000413920 1403 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 U8.9-201ENST00000365667 134 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.6□□□□□ -2.15
ABCA4P78363 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
ABCA4P78363 U3.37-201ENST00000408528 213 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AP000275.1-201ENST00000411943 390 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.6□□□□□ -2.15
ABCA4P78363 AC027673.1-201ENST00000456245 405 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AC107393.1-201ENST00000512403 346 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AC010546.1-201ENST00000569391 485 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 MIR5089-201ENST00000580047 84 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 ZNF92P3-201ENST00000596594 954 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AC073111.2-201ENST00000605657 1075 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 AP003122.6-201ENST00000623831 495 ntBASIC1.6□□□□□ -2.15
ABCA4P78363 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
ABCA4P78363 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ABCA4P78363 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ABCA4P78363 RNU6-244P-201ENST00000391028 104 ntBASIC1.59□□□□□ -2.15
ABCA4P78363 MTND4P13-201ENST00000402078 1023 ntBASIC1.59□□□□□ -2.15
ABCA4P78363 BX682237.1-201ENST00000415016 335 ntBASIC1.59□□□□□ -2.15
ABCA4P78363 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.59□□□□□ -2.15
ABCA4P78363 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.59□□□□□ -2.15
ABCA4P78363 Z73417.1-201ENST00000447373 778 ntBASIC1.59□□□□□ -2.15
ABCA4P78363 AC098799.2-201ENST00000509466 868 ntBASIC1.59□□□□□ -2.15
ABCA4P78363 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.59□□□□□ -2.15
ABCA4P78363 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.15
ABCA4P78363 FAM92A1P1-201ENST00000528023 890 ntBASIC1.59□□□□□ -2.15
ABCA4P78363 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.59□□□□□ -2.15
ABCA4P78363 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.59□□□□□ -2.15
ABCA4P78363 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
ABCA4P78363 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.59□□□□□ -2.15
ABCA4P78363 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
ABCA4P78363 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
ABCA4P78363 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.16
ABCA4P78363 RNA5SP160-201ENST00000364866 120 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 Z98749.2-208ENST00000381646 500 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 RNU1-57P-201ENST00000384491 166 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
ABCA4P78363 RNA5SP38-201ENST00000410750 119 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 RPS15AP12-201ENST00000419498 388 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.59□□□□□ -2.16
ABCA4P78363 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.59□□□□□ -2.16
ABCA4P78363 HMGB1P27-201ENST00000431429 603 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 BX322784.1-201ENST00000455793 1077 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 AC110792.2-201ENST00000510278 224 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.59□□□□□ -2.16
ABCA4P78363 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.16
ABCA4P78363 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms