Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNU6-461P-201ENST00000364195 107 ntBASIC1.71□□□□□ -2.14
UBA52P62987 RNU6-317P-201ENST00000384031 107 ntBASIC1.71□□□□□ -2.14
UBA52P62987 SNORA1.3-201ENST00000384676 136 ntBASIC1.71□□□□□ -2.14
UBA52P62987 SNORA26.9-201ENST00000391322 122 ntBASIC1.71□□□□□ -2.14
UBA52P62987 RNU6-1140P-201ENST00000410517 106 ntBASIC1.71□□□□□ -2.14
UBA52P62987 Z77249.1-201ENST00000444622 1175 ntBASIC1.71□□□□□ -2.14
UBA52P62987 COX6CP12-201ENST00000446748 202 ntBASIC1.71□□□□□ -2.14
UBA52P62987 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.71□□□□□ -2.14
UBA52P62987 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.71□□□□□ -2.14
UBA52P62987 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.71□□□□□ -2.14
UBA52P62987 AC004062.1-201ENST00000509926 645 ntBASIC1.71□□□□□ -2.14
UBA52P62987 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.71□□□□□ -2.14
UBA52P62987 RNU2-44P-201ENST00000516795 194 ntBASIC1.71□□□□□ -2.14
UBA52P62987 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.71□□□□□ -2.14
UBA52P62987 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBA52P62987 AC011494.1-201ENST00000596454 237 ntBASIC1.71□□□□□ -2.14
UBA52P62987 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.71□□□□□ -2.14
UBA52P62987 AC068880.5-201ENST00000624331 290 ntBASIC1.71□□□□□ -2.14
UBA52P62987 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBA52P62987 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
UBA52P62987 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
UBA52P62987 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.7□□□□□ -2.14
UBA52P62987 RNU6-666P-201ENST00000363499 107 ntBASIC1.7□□□□□ -2.14
UBA52P62987 RN7SKP226-201ENST00000364912 300 ntBASIC1.7□□□□□ -2.14
UBA52P62987 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
UBA52P62987 U8.13-201ENST00000390842 128 ntBASIC1.7□□□□□ -2.14
UBA52P62987 AL513475.1-201ENST00000406602 315 ntBASIC1.7□□□□□ -2.14
UBA52P62987 AC114973.1-201ENST00000429057 632 ntBASIC1.7□□□□□ -2.14
UBA52P62987 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.7□□□□□ -2.14
UBA52P62987 RPL7P54-201ENST00000438336 674 ntBASIC1.7□□□□□ -2.14
UBA52P62987 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.7□□□□□ -2.14
UBA52P62987 CBWD4P-201ENST00000445695 655 ntBASIC1.7□□□□□ -2.14
UBA52P62987 RNU7-26P-201ENST00000458980 63 ntBASIC1.7□□□□□ -2.14
UBA52P62987 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.7□□□□□ -2.14
UBA52P62987 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.7□□□□□ -2.14
UBA52P62987 AC083923.1-201ENST00000523708 376 ntBASIC1.7□□□□□ -2.14
UBA52P62987 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBA52P62987 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.7□□□□□ -2.14
UBA52P62987 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.7□□□□□ -2.14
UBA52P62987 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.7□□□□□ -2.14
UBA52P62987 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.7□□□□□ -2.14
UBA52P62987 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.7□□□□□ -2.14
UBA52P62987 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UBA52P62987 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.7□□□□□ -2.14
UBA52P62987 CR589904.2-201ENST00000612533 440 ntBASIC1.7□□□□□ -2.14
UBA52P62987 MIR7973-1-201ENST00000614683 76 ntBASIC1.7□□□□□ -2.14
UBA52P62987 AL162373.1-201ENST00000620433 407 ntBASIC1.7□□□□□ -2.14
UBA52P62987 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBA52P62987 AL354685.2-201ENST00000448218 1447 ntBASIC1.69□□□□□ -2.14
UBA52P62987 Y_RNA.140-201ENST00000363474 103 ntBASIC1.69□□□□□ -2.14
UBA52P62987 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.69□□□□□ -2.14
UBA52P62987 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.69□□□□□ -2.14
UBA52P62987 SNORD23.1-201ENST00000408212 104 ntBASIC1.69□□□□□ -2.14
UBA52P62987 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.69□□□□□ -2.14
UBA52P62987 ZNF90P2-204ENST00000419323 1075 ntBASIC1.69□□□□□ -2.14
UBA52P62987 RPL7P30-201ENST00000420888 709 ntBASIC1.69□□□□□ -2.14
UBA52P62987 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.69□□□□□ -2.14
UBA52P62987 AL445646.1-201ENST00000431784 216 ntBASIC1.69□□□□□ -2.14
UBA52P62987 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.69□□□□□ -2.14
UBA52P62987 AC007677.1-201ENST00000445757 515 ntBASIC1.69□□□□□ -2.14
UBA52P62987 AL136380.1-201ENST00000447970 162 ntBASIC1.69□□□□□ -2.14
UBA52P62987 AL118520.1-201ENST00000450770 291 ntBASIC1.69□□□□□ -2.14
UBA52P62987 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.69□□□□□ -2.14
UBA52P62987 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.69□□□□□ -2.14
UBA52P62987 AC097493.1-201ENST00000463958 372 ntBASIC1.69□□□□□ -2.14
UBA52P62987 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.69□□□□□ -2.14
UBA52P62987 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.69□□□□□ -2.14
UBA52P62987 FAM92A1P1-201ENST00000528023 890 ntBASIC1.69□□□□□ -2.14
UBA52P62987 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.69□□□□□ -2.14
UBA52P62987 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.69□□□□□ -2.14
UBA52P62987 AGGF1P5-201ENST00000567900 919 ntBASIC1.69□□□□□ -2.14
UBA52P62987 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.69□□□□□ -2.14
UBA52P62987 AC090897.2-201ENST00000581715 130 ntBASIC1.69□□□□□ -2.14
UBA52P62987 BNIP3P7-201ENST00000605641 516 ntBASIC1.69□□□□□ -2.14
UBA52P62987 AC103710.1-201ENST00000610003 901 ntBASIC1.69□□□□□ -2.14
UBA52P62987 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.69□□□□□ -2.14
UBA52P62987 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.69□□□□□ -2.14
UBA52P62987 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
UBA52P62987 MTND4P35-201ENST00000604257 1375 ntBASIC1.69□□□□□ -2.14
UBA52P62987 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBA52P62987 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBA52P62987 Y_RNA.338-201ENST00000365320 114 ntBASIC1.68□□□□□ -2.14
UBA52P62987 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
UBA52P62987 MIR17-201ENST00000385012 84 ntBASIC1.68□□□□□ -2.14
UBA52P62987 AC019129.1-201ENST00000403786 261 ntBASIC1.68□□□□□ -2.14
UBA52P62987 MIR1250-201ENST00000408098 113 ntBASIC1.68□□□□□ -2.14
UBA52P62987 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.68□□□□□ -2.14
UBA52P62987 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.68□□□□□ -2.14
UBA52P62987 HMGN2P19-201ENST00000425149 265 ntBASIC1.68□□□□□ -2.14
UBA52P62987 AL513321.1-201ENST00000441175 761 ntBASIC1.68□□□□□ -2.14
UBA52P62987 USP9YP8-201ENST00000441913 500 ntBASIC1.68□□□□□ -2.14
UBA52P62987 AC017007.3-201ENST00000479865 435 ntBASIC1.68□□□□□ -2.14
UBA52P62987 FABP5P6-201ENST00000510588 409 ntBASIC1.68□□□□□ -2.14
UBA52P62987 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.68□□□□□ -2.14
UBA52P62987 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.68□□□□□ -2.14
UBA52P62987 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.68□□□□□ -2.14
UBA52P62987 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.68□□□□□ -2.14
UBA52P62987 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBA52P62987 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.68□□□□□ -2.14
UBA52P62987 AL022099.1-201ENST00000604551 712 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms