Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 AL009028.1-201ENST00000604895 802 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC005000.2-201ENST00000605468 310 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC091965.4-201ENST00000607691 587 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 uc_338.32-201ENST00000615087 172 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC008250.2-201ENST00000615261 205 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC108479.2-201ENST00000617314 601 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
EIF4A1P60842 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.28□□□□□ -1.72
EIF4A1P60842 FAM35DP-201ENST00000323387 2712 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 RNU6-730P-201ENST00000383954 104 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 RNU6-878P-201ENST00000384578 110 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 SNORA48.2-201ENST00000390926 124 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AL136116.1-201ENST00000403591 381 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 PSMA6P3-201ENST00000428242 164 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AL590233.1-201ENST00000430017 456 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC127537.2-201ENST00000439258 465 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.28□□□□□ -1.72
EIF4A1P60842 snoU109.1-201ENST00000459339 135 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC012170.1-201ENST00000495139 359 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.28□□□□□ -1.72
EIF4A1P60842 PTGES3P3-201ENST00000511479 482 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EIF4A1P60842 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC016957.1-201ENST00000534895 309 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 CBX3P5-201ENST00000552017 521 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.28□□□□□ -1.72
EIF4A1P60842 MIR5004-201ENST00000579078 107 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 VN1R79P-201ENST00000593540 513 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AL162713.1-201ENST00000604480 262 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC138749.5-201ENST00000611461 208 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AC116165.2-201ENST00000616705 206 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AL356321.1-201ENST00000621360 228 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.28□□□□□ -1.72
EIF4A1P60842 AC068137.3-201ENST00000639191 341 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 AC073869.6-201ENST00000640656 341 ntBASIC4.28□□□□□ -1.72
EIF4A1P60842 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
EIF4A1P60842 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.28□□□□□ -1.72
EIF4A1P60842 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
EIF4A1P60842 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
EIF4A1P60842 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.27□□□□□ -1.73
EIF4A1P60842 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
EIF4A1P60842 CCT4P2-201ENST00000233836 1548 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EIF4A1P60842 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EIF4A1P60842 Y_RNA.6-201ENST00000362350 114 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 RNU6-28P-201ENST00000362378 107 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 RNA5SP374-201ENST00000362939 125 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 RNU6-259P-201ENST00000383999 107 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
EIF4A1P60842 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.27□□□□□ -1.73
EIF4A1P60842 Y_RNA.608-201ENST00000410647 95 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.27□□□□□ -1.73
EIF4A1P60842 HMGB3P23-201ENST00000414981 585 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 OR2B8P-201ENST00000432841 938 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.27□□□□□ -1.73
EIF4A1P60842 AC008264.1-201ENST00000447612 367 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.27□□□□□ -1.73
EIF4A1P60842 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.27□□□□□ -1.73
EIF4A1P60842 AC146507.1-201ENST00000468335 354 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AP001025.2-201ENST00000490908 477 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AC112204.1-201ENST00000502591 103 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.27□□□□□ -1.73
EIF4A1P60842 NDUFB4P2-201ENST00000509515 391 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 HIGD1AP3-201ENST00000515857 278 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 IGLVIV-53-201ENST00000520107 367 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.27□□□□□ -1.73
EIF4A1P60842 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.27□□□□□ -1.73
EIF4A1P60842 AC024224.1-201ENST00000538284 609 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
EIF4A1P60842 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.27□□□□□ -1.73
EIF4A1P60842 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.27□□□□□ -1.73
EIF4A1P60842 AC009977.1-201ENST00000586015 570 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AL353997.4-201ENST00000586196 166 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 OR4G1P-201ENST00000588632 938 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AC099654.12-201ENST00000639868 649 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
EIF4A1P60842 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 AL049780.3-201ENST00000624612 1583 ntBASIC4.27□□□□□ -1.73
EIF4A1P60842 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
EIF4A1P60842 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.26□□□□□ -1.73
EIF4A1P60842 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms