Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RPL12P20-201ENST00000475538 479 ntBASIC5.3□□□□□ -1.56
USP11P51784 AC005726.1-201ENST00000494679 427 ntBASIC5.3□□□□□ -1.56
USP11P51784 AC068305.1-201ENST00000497406 726 ntBASIC5.3□□□□□ -1.56
USP11P51784 RNU7-51P-201ENST00000516560 62 ntBASIC5.3□□□□□ -1.56
USP11P51784 AF186190.1-201ENST00000517470 480 ntBASIC5.3□□□□□ -1.56
USP11P51784 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.3□□□□□ -1.56
USP11P51784 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.3□□□□□ -1.56
USP11P51784 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.3□□□□□ -1.56
USP11P51784 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.3□□□□□ -1.56
USP11P51784 AL138726.1-201ENST00000614873 333 ntBASIC5.3□□□□□ -1.56
USP11P51784 AL355365.1-201ENST00000616480 294 ntBASIC5.3□□□□□ -1.56
USP11P51784 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.3□□□□□ -1.56
USP11P51784 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
USP11P51784 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
USP11P51784 ZNF137P-201ENST00000456718 1920 ntBASIC5.3□□□□□ -1.56
USP11P51784 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP11P51784 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.3□□□□□ -1.56
USP11P51784 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP11P51784 AL136164.3-201ENST00000624429 3978 ntBASIC5.3□□□□□ -1.56
USP11P51784 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
USP11P51784 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP11P51784 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.29□□□□□ -1.56
USP11P51784 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.29□□□□□ -1.56
USP11P51784 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 SNORD113.2-201ENST00000364166 89 ntBASIC5.29□□□□□ -1.56
USP11P51784 Y_RNA.512-201ENST00000384518 102 ntBASIC5.29□□□□□ -1.56
USP11P51784 Y_RNA.556-201ENST00000384677 113 ntBASIC5.29□□□□□ -1.56
USP11P51784 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP11P51784 RNA5SP397-201ENST00000391323 118 ntBASIC5.29□□□□□ -1.56
USP11P51784 AL592291.1-201ENST00000403830 352 ntBASIC5.29□□□□□ -1.56
USP11P51784 RN7SKP106-201ENST00000410832 272 ntBASIC5.29□□□□□ -1.56
USP11P51784 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.29□□□□□ -1.56
USP11P51784 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.29□□□□□ -1.56
USP11P51784 DPH3P2-201ENST00000422618 250 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.29□□□□□ -1.56
USP11P51784 RPL23AP43-201ENST00000446445 471 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC108059.3-201ENST00000456388 214 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.29□□□□□ -1.56
USP11P51784 SCARNA10-201ENST00000459255 330 ntBASIC5.29□□□□□ -1.56
USP11P51784 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.29□□□□□ -1.56
USP11P51784 AC008526.1-201ENST00000509149 338 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.29□□□□□ -1.56
USP11P51784 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP11P51784 DEFB109D-201ENST00000529497 240 ntBASIC5.29□□□□□ -1.56
USP11P51784 OR8R1P-201ENST00000543943 764 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC135001.1-201ENST00000544546 283 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC062037.2-201ENST00000610137 73 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.29□□□□□ -1.56
USP11P51784 U3.53-201ENST00000628922 216 ntBASIC5.29□□□□□ -1.56
USP11P51784 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.29□□□□□ -1.56
USP11P51784 OR14L1P-202ENST00000641545 3009 ntBASIC5.29□□□□□ -1.56
USP11P51784 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
USP11P51784 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP11P51784 MTND5P27-201ENST00000428871 1720 ntBASIC5.28□□□□□ -1.56
USP11P51784 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.28□□□□□ -1.56
USP11P51784 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP11P51784 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.28□□□□□ -1.56
USP11P51784 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP11P51784 Y_RNA.80-201ENST00000362996 102 ntBASIC5.28□□□□□ -1.56
USP11P51784 RNU6-179P-201ENST00000363350 107 ntBASIC5.28□□□□□ -1.56
USP11P51784 Y_RNA.404-201ENST00000383978 102 ntBASIC5.28□□□□□ -1.56
USP11P51784 CYB5AP4-201ENST00000396692 399 ntBASIC5.28□□□□□ -1.56
USP11P51784 AL080315.1-201ENST00000406055 466 ntBASIC5.28□□□□□ -1.56
USP11P51784 RPS16P5-201ENST00000406501 404 ntBASIC5.28□□□□□ -1.56
USP11P51784 PDSS1P1-201ENST00000422953 1114 ntBASIC5.28□□□□□ -1.56
USP11P51784 RSL24D1P6-201ENST00000426934 401 ntBASIC5.28□□□□□ -1.56
USP11P51784 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.28□□□□□ -1.56
USP11P51784 AC092013.1-201ENST00000438795 332 ntBASIC5.28□□□□□ -1.56
USP11P51784 CEACAMP6-201ENST00000452007 574 ntBASIC5.28□□□□□ -1.56
USP11P51784 AL445433.1-201ENST00000457507 257 ntBASIC5.28□□□□□ -1.56
USP11P51784 AC079804.1-201ENST00000461922 436 ntBASIC5.28□□□□□ -1.56
USP11P51784 RN7SL809P-201ENST00000482040 297 ntBASIC5.28□□□□□ -1.56
USP11P51784 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.28□□□□□ -1.56
USP11P51784 AC093767.1-201ENST00000504523 156 ntBASIC5.28□□□□□ -1.56
USP11P51784 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.28□□□□□ -1.56
USP11P51784 AC007016.1-201ENST00000512110 244 ntBASIC5.28□□□□□ -1.56
USP11P51784 RNU2-10P-201ENST00000516375 211 ntBASIC5.28□□□□□ -1.56
USP11P51784 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.28□□□□□ -1.56
USP11P51784 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP11P51784 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.28□□□□□ -1.56
USP11P51784 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP11P51784 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USP11P51784 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.28□□□□□ -1.56
USP11P51784 COX6CP3-201ENST00000580869 223 ntBASIC5.28□□□□□ -1.56
USP11P51784 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.28□□□□□ -1.56
USP11P51784 AC123786.2-201ENST00000603459 275 ntBASIC5.28□□□□□ -1.56
USP11P51784 RNF138P2-201ENST00000603490 592 ntBASIC5.28□□□□□ -1.56
USP11P51784 AC011890.2-201ENST00000613393 294 ntBASIC5.28□□□□□ -1.56
USP11P51784 AC004696.1-201ENST00000614345 607 ntBASIC5.28□□□□□ -1.56
USP11P51784 AC078938.1-201ENST00000620993 318 ntBASIC5.28□□□□□ -1.56
USP11P51784 AL357559.1-201ENST00000622228 274 ntBASIC5.28□□□□□ -1.56
USP11P51784 AP000843.1-201ENST00000624880 701 ntBASIC5.28□□□□□ -1.56
USP11P51784 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms