Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AP005431.1-201ENST00000618479 319 ntBASIC5.33□□□□□ -1.56
RNF144AP50876 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF144AP50876 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF144AP50876 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF144AP50876 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF144AP50876 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF144AP50876 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF144AP50876 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 PRO1804-201ENST00000623780 2050 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 AC007685.1-201ENST00000329806 452 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 Y_RNA.292-201ENST00000364904 97 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 RNU6-290P-201ENST00000365212 101 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 RNU6-102P-201ENST00000384485 104 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AF186996.5-201ENST00000418098 904 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF144AP50876 PPP1R11P2-201ENST00000423543 382 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC093655.2-201ENST00000425735 631 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 CRIP1P1-201ENST00000427567 185 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC087650.1-201ENST00000431445 468 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC099670.2-201ENST00000435130 321 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC090774.1-201ENST00000435925 246 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC073587.1-201ENST00000447093 876 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF144AP50876 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 RNU1-88P-201ENST00000459274 128 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 RN7SL197P-201ENST00000466981 299 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF144AP50876 AC022133.1-201ENST00000490961 571 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 HMGN1P11-201ENST00000508668 303 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 TOMM20P1-201ENST00000534518 427 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF144AP50876 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF144AP50876 AC126615.2-201ENST00000553003 515 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF144AP50876 AC023824.2-201ENST00000566185 400 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.32□□□□□ -1.56
RNF144AP50876 AC009318.2-201ENST00000610917 651 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 AC240442.1-201ENST00000616055 283 ntBASIC5.32□□□□□ -1.56
RNF144AP50876 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RNF144AP50876 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF144AP50876 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF144AP50876 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
RNF144AP50876 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF144AP50876 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RNF144AP50876 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RNF144AP50876 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RNF144AP50876 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.31□□□□□ -1.56
RNF144AP50876 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF144AP50876 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RNF144AP50876 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RNF144AP50876 Y_RNA.534-201ENST00000384599 112 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RNF144AP50876 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 RNU6-735P-201ENST00000410612 107 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF144AP50876 AL096701.2-201ENST00000416920 238 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF144AP50876 RPL26P6-201ENST00000440913 438 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF144AP50876 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF144AP50876 RPS18P6-201ENST00000476880 458 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 PPIAP19-201ENST00000486414 492 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF144AP50876 RNU1-86P-201ENST00000516108 154 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 MIR892C-201ENST00000516410 77 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 RNU1-107P-201ENST00000516617 154 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 CASP1P1-201ENST00000526345 212 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AC018552.1-201ENST00000562099 811 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AC114947.2-201ENST00000565748 2125 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.31□□□□□ -1.56
RNF144AP50876 AL138895.2-201ENST00000603019 178 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AC116447.1-201ENST00000613153 453 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AL590240.4-201ENST00000616908 390 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF144AP50876 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.31□□□□□ -1.56
RNF144AP50876 MIR4275-201ENST00000636486 87 ntBASIC5.31□□□□□ -1.56
RNF144AP50876 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RNF144AP50876 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms