Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CTCFP49711 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTCFP49711 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.98□□□□□ -1.77
CTCFP49711 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTCFP49711 HMGN1P24-201ENST00000412282 298 ntBASIC3.98□□□□□ -1.77
CTCFP49711 RPS15AP38-201ENST00000413110 372 ntBASIC3.98□□□□□ -1.77
CTCFP49711 TOMM22P1-201ENST00000418578 312 ntBASIC3.98□□□□□ -1.77
CTCFP49711 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.98□□□□□ -1.77
CTCFP49711 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.98□□□□□ -1.77
CTCFP49711 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.98□□□□□ -1.77
CTCFP49711 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.98□□□□□ -1.77
CTCFP49711 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.98□□□□□ -1.77
CTCFP49711 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.98□□□□□ -1.77
CTCFP49711 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.98□□□□□ -1.77
CTCFP49711 RPS4XP13-201ENST00000483219 789 ntBASIC3.98□□□□□ -1.77
CTCFP49711 TRBV12-2-201ENST00000489763 344 ntBASIC3.98□□□□□ -1.77
CTCFP49711 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.98□□□□□ -1.77
CTCFP49711 AC006390.1-201ENST00000508068 283 ntBASIC3.98□□□□□ -1.77
CTCFP49711 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.98□□□□□ -1.77
CTCFP49711 OR5AP1P-201ENST00000529730 940 ntBASIC3.98□□□□□ -1.77
CTCFP49711 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.98□□□□□ -1.77
CTCFP49711 SETP7-201ENST00000552169 453 ntBASIC3.98□□□□□ -1.77
CTCFP49711 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.98□□□□□ -1.77
CTCFP49711 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.98□□□□□ -1.77
CTCFP49711 AC012669.1-201ENST00000603209 283 ntBASIC3.98□□□□□ -1.77
CTCFP49711 AC004853.1-201ENST00000604902 698 ntBASIC3.98□□□□□ -1.77
CTCFP49711 AL365503.1-201ENST00000605247 905 ntBASIC3.98□□□□□ -1.77
CTCFP49711 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTCFP49711 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CTCFP49711 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTCFP49711 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTCFP49711 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.98□□□□□ -1.77
CTCFP49711 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.97□□□□□ -1.77
CTCFP49711 AL645937.1-201ENST00000641739 1652 ntBASIC3.97□□□□□ -1.77
CTCFP49711 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CTCFP49711 SNORA70B-201ENST00000384210 135 ntBASIC3.97□□□□□ -1.77
CTCFP49711 RN7SKP266-201ENST00000410232 287 ntBASIC3.97□□□□□ -1.77
CTCFP49711 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.97□□□□□ -1.77
CTCFP49711 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.97□□□□□ -1.77
CTCFP49711 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 MTCO3P12-201ENST00000416718 547 ntBASIC3.97□□□□□ -1.77
CTCFP49711 AC099677.1-201ENST00000420575 175 ntBASIC3.97□□□□□ -1.77
CTCFP49711 TOMM20P4-201ENST00000427861 435 ntBASIC3.97□□□□□ -1.77
CTCFP49711 MTCYBP39-201ENST00000437562 491 ntBASIC3.97□□□□□ -1.77
CTCFP49711 LSM1P1-201ENST00000438629 273 ntBASIC3.97□□□□□ -1.77
CTCFP49711 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.97□□□□□ -1.77
CTCFP49711 MTATP6P26-201ENST00000445926 662 ntBASIC3.97□□□□□ -1.77
CTCFP49711 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.97□□□□□ -1.77
CTCFP49711 HMGB1P15-201ENST00000453854 435 ntBASIC3.97□□□□□ -1.77
CTCFP49711 RPL30P9-201ENST00000465586 330 ntBASIC3.97□□□□□ -1.77
CTCFP49711 AL024509.2-201ENST00000493462 493 ntBASIC3.97□□□□□ -1.77
CTCFP49711 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.97□□□□□ -1.77
CTCFP49711 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.97□□□□□ -1.77
CTCFP49711 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.97□□□□□ -1.77
CTCFP49711 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.97□□□□□ -1.77
CTCFP49711 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.97□□□□□ -1.77
CTCFP49711 MIR3186-201ENST00000577404 85 ntBASIC3.97□□□□□ -1.77
CTCFP49711 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.97□□□□□ -1.77
CTCFP49711 AC055876.5-201ENST00000605667 259 ntBASIC3.97□□□□□ -1.77
CTCFP49711 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.97□□□□□ -1.77
CTCFP49711 AC091905.1-201ENST00000624400 311 ntBASIC3.97□□□□□ -1.77
CTCFP49711 AC092192.1-201ENST00000633154 1018 ntBASIC3.97□□□□□ -1.77
CTCFP49711 CU459211.1-201ENST00000635667 749 ntBASIC3.97□□□□□ -1.77
CTCFP49711 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CTCFP49711 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTCFP49711 CR381670.1-201ENST00000624291 1693 ntBASIC3.97□□□□□ -1.77
CTCFP49711 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CTCFP49711 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTCFP49711 Y_RNA.234-201ENST00000364409 97 ntBASIC3.96□□□□□ -1.78
CTCFP49711 HSPE1P8-201ENST00000406997 288 ntBASIC3.96□□□□□ -1.78
CTCFP49711 RNU6-712P-201ENST00000410558 100 ntBASIC3.96□□□□□ -1.78
CTCFP49711 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.96□□□□□ -1.78
CTCFP49711 AC009518.2-201ENST00000418056 731 ntBASIC3.96□□□□□ -1.78
CTCFP49711 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.96□□□□□ -1.78
CTCFP49711 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.96□□□□□ -1.78
CTCFP49711 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.96□□□□□ -1.78
CTCFP49711 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.96□□□□□ -1.78
CTCFP49711 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.96□□□□□ -1.78
CTCFP49711 ARF4P2-201ENST00000430209 526 ntBASIC3.96□□□□□ -1.78
CTCFP49711 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.96□□□□□ -1.78
CTCFP49711 RSU1P2-202ENST00000437884 485 ntBASIC3.96□□□□□ -1.78
CTCFP49711 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.96□□□□□ -1.78
CTCFP49711 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.96□□□□□ -1.78
CTCFP49711 RPL7P36-201ENST00000444633 681 ntBASIC3.96□□□□□ -1.78
CTCFP49711 RPL7P52-201ENST00000449200 742 ntBASIC3.96□□□□□ -1.78
CTCFP49711 AC098824.1-201ENST00000453565 980 ntBASIC3.96□□□□□ -1.78
CTCFP49711 MTCO3P20-201ENST00000454926 688 ntBASIC3.96□□□□□ -1.78
CTCFP49711 DNAJC19P1-201ENST00000455312 319 ntBASIC3.96□□□□□ -1.78
CTCFP49711 snoU13.26-201ENST00000459452 105 ntBASIC3.96□□□□□ -1.78
CTCFP49711 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.96□□□□□ -1.78
CTCFP49711 AC021678.1-201ENST00000505195 936 ntBASIC3.96□□□□□ -1.78
CTCFP49711 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.96□□□□□ -1.78
CTCFP49711 TXNP6-201ENST00000510190 310 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms