Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DEFA7P-201ENST00000382676 285 ntBASIC2.92□□□□□ -1.94
SSR1P43307 RNU1-52P-201ENST00000384190 164 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.92□□□□□ -1.94
SSR1P43307 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.92□□□□□ -1.94
SSR1P43307 AC007742.1-201ENST00000425789 329 ntBASIC2.92□□□□□ -1.94
SSR1P43307 DPRXP1-201ENST00000426312 460 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.92□□□□□ -1.94
SSR1P43307 AC024082.2-201ENST00000434771 238 ntBASIC2.92□□□□□ -1.94
SSR1P43307 ELOCP26-201ENST00000436067 329 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AL513043.1-201ENST00000439124 535 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.92□□□□□ -1.94
SSR1P43307 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
SSR1P43307 RPL39P6-201ENST00000448289 150 ntBASIC2.92□□□□□ -1.94
SSR1P43307 RPS15AP17-201ENST00000470598 390 ntBASIC2.92□□□□□ -1.94
SSR1P43307 CAB39P1-201ENST00000502277 460 ntBASIC2.92□□□□□ -1.94
SSR1P43307 MTCYBP17-201ENST00000503579 789 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC147055.4-201ENST00000504399 745 ntBASIC2.92□□□□□ -1.94
SSR1P43307 COX7A2P2-201ENST00000505291 250 ntBASIC2.92□□□□□ -1.94
SSR1P43307 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.92□□□□□ -1.94
SSR1P43307 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.92□□□□□ -1.94
SSR1P43307 AC069306.1-201ENST00000507006 843 ntBASIC2.92□□□□□ -1.94
SSR1P43307 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.92□□□□□ -1.94
SSR1P43307 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.92□□□□□ -1.94
SSR1P43307 SNORA19.3-201ENST00000516165 130 ntBASIC2.92□□□□□ -1.94
SSR1P43307 SNORA74D-201ENST00000516404 141 ntBASIC2.92□□□□□ -1.94
SSR1P43307 SCARNA13-201ENST00000516672 275 ntBASIC2.92□□□□□ -1.94
SSR1P43307 SNORA31.21-201ENST00000517180 77 ntBASIC2.92□□□□□ -1.94
SSR1P43307 RNU6-1261P-201ENST00000517194 104 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.92□□□□□ -1.94
SSR1P43307 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.92□□□□□ -1.94
SSR1P43307 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.92□□□□□ -1.94
SSR1P43307 AC010546.1-201ENST00000569391 485 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC012443.1-201ENST00000605605 231 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC124016.2-201ENST00000610058 665 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC126544.2-201ENST00000625174 749 ntBASIC2.92□□□□□ -1.94
SSR1P43307 MKKS-204ENST00000639674 192 ntBASIC2.92□□□□□ -1.94
SSR1P43307 AC087359.1-201ENST00000508335 1740 ntBASIC2.92□□□□□ -1.94
SSR1P43307 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSR1P43307 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSR1P43307 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSR1P43307 AC073346.2-201ENST00000624724 2058 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.91□□□□□ -1.94
SSR1P43307 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSR1P43307 MIR26A1-201ENST00000362205 77 ntBASIC2.91□□□□□ -1.94
SSR1P43307 RNU6-878P-201ENST00000384578 110 ntBASIC2.91□□□□□ -1.94
SSR1P43307 Y_RNA.578-201ENST00000390903 88 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL136372.1-201ENST00000403060 228 ntBASIC2.91□□□□□ -1.94
SSR1P43307 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.91□□□□□ -1.94
SSR1P43307 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.91□□□□□ -1.94
SSR1P43307 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSR1P43307 AL590233.1-201ENST00000430017 456 ntBASIC2.91□□□□□ -1.94
SSR1P43307 THAP5P1-201ENST00000439089 262 ntBASIC2.91□□□□□ -1.94
SSR1P43307 PTGES3P1-201ENST00000439531 483 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL445687.1-201ENST00000439946 251 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL121871.1-201ENST00000443413 436 ntBASIC2.91□□□□□ -1.94
SSR1P43307 MTCYBP42-201ENST00000444653 1130 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
SSR1P43307 RPS29P26-201ENST00000477483 171 ntBASIC2.91□□□□□ -1.94
SSR1P43307 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSR1P43307 AC109464.2-201ENST00000510242 943 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AC093677.1-201ENST00000514414 678 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.91□□□□□ -1.94
SSR1P43307 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.91□□□□□ -1.94
SSR1P43307 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.91□□□□□ -1.94
SSR1P43307 AC009237.15-201ENST00000610252 501 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL442067.2-201ENST00000614033 363 ntBASIC2.91□□□□□ -1.94
SSR1P43307 CU459211.1-201ENST00000635667 749 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AP005901.5-201ENST00000545779 1796 ntBASIC2.91□□□□□ -1.94
SSR1P43307 OR4G11P-202ENST00000642116 1414 ntBASIC2.91□□□□□ -1.94
SSR1P43307 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SSR1P43307 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.91□□□□□ -1.94
SSR1P43307 AC012321.1-201ENST00000561622 1588 ntBASIC2.91□□□□□ -1.94
SSR1P43307 AL513185.3-201ENST00000433335 1300 ntBASIC2.91□□□□□ -1.94
SSR1P43307 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.9□□□□□ -1.94
SSR1P43307 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.9□□□□□ -1.94
SSR1P43307 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.9□□□□□ -1.94
SSR1P43307 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSR1P43307 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.9□□□□□ -1.95
SSR1P43307 Y_RNA.25-201ENST00000362528 102 ntBASIC2.9□□□□□ -1.95
SSR1P43307 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
SSR1P43307 RNU1-140P-201ENST00000365040 165 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.9□□□□□ -1.95
SSR1P43307 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.9□□□□□ -1.95
SSR1P43307 MORF4L1P6-201ENST00000418771 268 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.9□□□□□ -1.95
SSR1P43307 AC019178.2-201ENST00000423595 505 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AC092427.1-201ENST00000439177 601 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.9□□□□□ -1.95
SSR1P43307 AL353691.1-201ENST00000451332 387 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.9□□□□□ -1.95
SSR1P43307 KC877373.1-201ENST00000479066 408 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AL135752.1-201ENST00000479477 471 ntBASIC2.9□□□□□ -1.95
SSR1P43307 FAM172BP-201ENST00000487497 1089 ntBASIC2.9□□□□□ -1.95
SSR1P43307 AC090096.1-201ENST00000489168 390 ntBASIC2.9□□□□□ -1.95
SSR1P43307 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.9□□□□□ -1.95
SSR1P43307 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.9□□□□□ -1.95
SSR1P43307 SLC25A15P5-201ENST00000508033 253 ntBASIC2.9□□□□□ -1.95
SSR1P43307 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.9□□□□□ -1.95
SSR1P43307 CASP1P1-201ENST00000526345 212 ntBASIC2.9□□□□□ -1.95
SSR1P43307 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms