Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC010928.2-201ENST00000588017 287 ntBASIC1.51□□□□□ -2.17
SNCAP37840 MTCO3P22-201ENST00000603219 784 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AC103710.1-201ENST00000610003 901 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.51□□□□□ -2.17
SNCAP37840 AC020658.4-201ENST00000613987 684 ntBASIC1.51□□□□□ -2.17
SNCAP37840 SCARNA15.3-201ENST00000626315 122 ntBASIC1.51□□□□□ -2.17
SNCAP37840 SCARNA4.1-201ENST00000628597 123 ntBASIC1.51□□□□□ -2.17
SNCAP37840 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNCAP37840 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNCAP37840 RNU4-82P-201ENST00000362443 140 ntBASIC1.5□□□□□ -2.17
SNCAP37840 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
SNCAP37840 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.5□□□□□ -2.17
SNCAP37840 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.5□□□□□ -2.17
SNCAP37840 RNA5SP56-201ENST00000410277 118 ntBASIC1.5□□□□□ -2.17
SNCAP37840 RNA5SP80-201ENST00000410475 111 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.5□□□□□ -2.17
SNCAP37840 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.5□□□□□ -2.17
SNCAP37840 PGBD4P6-201ENST00000421501 610 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.5□□□□□ -2.17
SNCAP37840 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.5□□□□□ -2.17
SNCAP37840 HMGB1P48-201ENST00000446155 598 ntBASIC1.5□□□□□ -2.17
SNCAP37840 RPL7P12-201ENST00000446719 750 ntBASIC1.5□□□□□ -2.17
SNCAP37840 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.5□□□□□ -2.17
SNCAP37840 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
SNCAP37840 BZW1P2-201ENST00000473537 826 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AC104687.1-201ENST00000485829 412 ntBASIC1.5□□□□□ -2.17
SNCAP37840 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.5□□□□□ -2.17
SNCAP37840 MTAPP1-201ENST00000489154 819 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.5□□□□□ -2.17
SNCAP37840 AC074050.1-201ENST00000563247 211 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AC106734.1-201ENST00000568646 663 ntBASIC1.5□□□□□ -2.17
SNCAP37840 MIR4435-1-201ENST00000582552 80 ntBASIC1.5□□□□□ -2.17
SNCAP37840 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AC025594.3-201ENST00000613068 790 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.5□□□□□ -2.17
SNCAP37840 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.5□□□□□ -2.17
SNCAP37840 AC097372.4-201ENST00000625025 466 ntBASIC1.5□□□□□ -2.17
SNCAP37840 AC116618.1-201ENST00000634617 774 ntBASIC1.5□□□□□ -2.17
SNCAP37840 NSRP1P1-201ENST00000444067 1693 ntBASIC1.5□□□□□ -2.17
SNCAP37840 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.5□□□□□ -2.17
SNCAP37840 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.5□□□□□ -2.17
SNCAP37840 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.5□□□□□ -2.17
SNCAP37840 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNCAP37840 MTND4P31-201ENST00000425607 1343 ntBASIC1.49□□□□□ -2.17
SNCAP37840 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNCAP37840 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SNCAP37840 Y_RNA.510-201ENST00000384511 114 ntBASIC1.49□□□□□ -2.17
SNCAP37840 RNU6-920P-201ENST00000410926 92 ntBASIC1.49□□□□□ -2.17
SNCAP37840 Z98742.3-201ENST00000418637 326 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.49□□□□□ -2.17
SNCAP37840 ARF4P4-201ENST00000439608 520 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.49□□□□□ -2.17
SNCAP37840 CABYRP1-201ENST00000465493 1045 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AC104689.1-201ENST00000473356 768 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AC010486.1-201ENST00000511793 424 ntBASIC1.49□□□□□ -2.17
SNCAP37840 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.49□□□□□ -2.17
SNCAP37840 RNU6-1308P-201ENST00000516817 103 ntBASIC1.49□□□□□ -2.17
SNCAP37840 HSPE1P18-201ENST00000517602 280 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.49□□□□□ -2.17
SNCAP37840 CASP1P1-201ENST00000526345 212 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.49□□□□□ -2.17
SNCAP37840 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.49□□□□□ -2.17
SNCAP37840 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.49□□□□□ -2.17
SNCAP37840 AC135628.1-201ENST00000568867 534 ntBASIC1.49□□□□□ -2.17
SNCAP37840 DEFB122-202ENST00000569013 197 ntBASIC1.49□□□□□ -2.17
SNCAP37840 OR4G1P-201ENST00000588632 938 ntBASIC1.49□□□□□ -2.17
SNCAP37840 XIAPP1-201ENST00000603162 600 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AL627230.6-201ENST00000611129 280 ntBASIC1.49□□□□□ -2.17
SNCAP37840 AL136981.2-201ENST00000617319 734 ntBASIC1.49□□□□□ -2.17
SNCAP37840 ELF2P3-201ENST00000445099 1506 ntBASIC1.49□□□□□ -2.17
SNCAP37840 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SNCAP37840 AP006437.1-201ENST00000641440 3685 ntBASIC1.48□□□□□ -2.17
SNCAP37840 RNU5D-1-201ENST00000363299 116 ntBASIC1.48□□□□□ -2.17
SNCAP37840 RN7SKP226-201ENST00000364912 300 ntBASIC1.48□□□□□ -2.17
SNCAP37840 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
SNCAP37840 UBE2V1P2-201ENST00000397758 440 ntBASIC1.48□□□□□ -2.17
SNCAP37840 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.48□□□□□ -2.17
SNCAP37840 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.48□□□□□ -2.17
SNCAP37840 TMEM167AP1-201ENST00000423409 219 ntBASIC1.48□□□□□ -2.17
SNCAP37840 Z98742.2-201ENST00000431564 187 ntBASIC1.48□□□□□ -2.17
SNCAP37840 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.48□□□□□ -2.17
SNCAP37840 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SNCAP37840 AC004866.2-201ENST00000438285 481 ntBASIC1.48□□□□□ -2.17
SNCAP37840 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.48□□□□□ -2.17
SNCAP37840 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SNCAP37840 OR6K5P-201ENST00000447050 945 ntBASIC1.48□□□□□ -2.17
SNCAP37840 ANKRD26P4-201ENST00000455755 950 ntBASIC1.48□□□□□ -2.17
SNCAP37840 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.48□□□□□ -2.17
SNCAP37840 PMCHL2-203ENST00000457791 237 ntBASIC1.48□□□□□ -2.17
SNCAP37840 RPL38P4-201ENST00000502376 214 ntBASIC1.48□□□□□ -2.17
SNCAP37840 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.48□□□□□ -2.17
SNCAP37840 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.48□□□□□ -2.17
SNCAP37840 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.48□□□□□ -2.17
SNCAP37840 RNU7-193P-201ENST00000516723 65 ntBASIC1.48□□□□□ -2.17
SNCAP37840 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.48□□□□□ -2.17
SNCAP37840 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.48□□□□□ -2.17
SNCAP37840 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.48□□□□□ -2.17
SNCAP37840 MIR4419B-201ENST00000577260 68 ntBASIC1.48□□□□□ -2.17
SNCAP37840 MIR3618-201ENST00000580330 88 ntBASIC1.48□□□□□ -2.17
SNCAP37840 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms