Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC008147.4-201ENST00000617570 1204 ntBASIC3.83□□□□□ -1.8
TM4SF1P30408 AC079597.1-201ENST00000624306 508 ntBASIC3.83□□□□□ -1.8
TM4SF1P30408 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF1P30408 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.83□□□□□ -1.8
TM4SF1P30408 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF1P30408 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF1P30408 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TM4SF1P30408 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.82□□□□□ -1.8
TM4SF1P30408 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.82□□□□□ -1.8
TM4SF1P30408 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF1P30408 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.82□□□□□ -1.8
TM4SF1P30408 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF1P30408 GABPAP-201ENST00000419271 1356 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF1P30408 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF1P30408 SNORA18.3-201ENST00000384122 132 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TM4SF1P30408 RPL7P25-201ENST00000404151 721 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 MIR1305-201ENST00000408300 86 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC107081.1-201ENST00000414975 361 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF1P30408 AC092447.3-201ENST00000426027 686 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC022018.1-201ENST00000430685 241 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.82□□□□□ -1.8
TM4SF1P30408 AL590103.1-201ENST00000434488 307 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AL606662.1-201ENST00000445763 553 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 MTCO1P27-201ENST00000448269 226 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF1P30408 AC021382.1-201ENST00000483523 359 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC083906.5-201ENST00000503722 328 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC022447.3-201ENST00000506865 495 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 MTND1P22-201ENST00000510572 951 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC034159.1-201ENST00000513885 583 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF1P30408 DUXAP5-201ENST00000529668 529 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF1P30408 AC138761.3-201ENST00000579993 334 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.82□□□□□ -1.8
TM4SF1P30408 VIS1.1-201ENST00000610517 203 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 AC012531.5-201ENST00000611375 151 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 FAM35DP-201ENST00000323387 2712 ntBASIC3.82□□□□□ -1.8
TM4SF1P30408 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF1P30408 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF1P30408 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TM4SF1P30408 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TM4SF1P30408 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
TM4SF1P30408 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TM4SF1P30408 RNU6-343P-201ENST00000364709 104 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AL121834.1-202ENST00000404494 277 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 RNU2-43P-201ENST00000410306 190 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 HMGB3P11-201ENST00000440127 604 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.81□□□□□ -1.8
TM4SF1P30408 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.81□□□□□ -1.8
TM4SF1P30408 FGF7P3-201ENST00000454645 303 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF1P30408 MTCO2P6-201ENST00000463134 685 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
TM4SF1P30408 VWA8P1-201ENST00000510889 176 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AC090281.1-201ENST00000523019 276 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF1P30408 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.81□□□□□ -1.8
TM4SF1P30408 SETP2-201ENST00000553886 926 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AC008015.1-201ENST00000555505 465 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 ZNF192P1-203ENST00000565888 810 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.81□□□□□ -1.8
TM4SF1P30408 AP001330.4-201ENST00000604350 154 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AL022099.1-201ENST00000604551 712 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.81□□□□□ -1.8
TM4SF1P30408 MIR6715A-201ENST00000615929 79 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 AC002550.2-201ENST00000621246 394 ntBASIC3.81□□□□□ -1.8
TM4SF1P30408 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TM4SF1P30408 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TM4SF1P30408 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TM4SF1P30408 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AL672167.1-206ENST00000356293 943 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 RNU6-853P-201ENST00000364306 107 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 DEFB109C-201ENST00000382575 264 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 DEFB109B-201ENST00000382656 264 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 RNU6-882P-201ENST00000391025 103 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AF228730.1-201ENST00000397972 663 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.8□□□□□ -1.8
TM4SF1P30408 RPS24P13-201ENST00000442520 397 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AC112653.1-201ENST00000443851 386 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 Z99127.3-201ENST00000448158 395 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF1P30408 RNU6-528P-201ENST00000516926 100 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 IGKV2D-23-201ENST00000518179 286 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 HMGN1P28-201ENST00000521340 364 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF1P30408 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.8□□□□□ -1.8
TM4SF1P30408 RFPL1S-203ENST00000539579 330 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms