Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL157786.1-207ENST00000627771 695 ntBASIC4.72□□□□□ -1.65
CNGA1P29973 AC138915.3-201ENST00000562908 1389 ntBASIC4.72□□□□□ -1.65
CNGA1P29973 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNGA1P29973 AL133412.1-201ENST00000380194 2992 ntBASIC4.72□□□□□ -1.65
CNGA1P29973 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNGA1P29973 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNGA1P29973 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.72□□□□□ -1.65
CNGA1P29973 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNGA1P29973 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNGA1P29973 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.71□□□□□ -1.65
CNGA1P29973 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
CNGA1P29973 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CNGA1P29973 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.71□□□□□ -1.66
CNGA1P29973 HSPE1P11-201ENST00000339579 310 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 Y_RNA.1-201ENST00000352915 104 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 RNA5SP502-201ENST00000362694 119 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 RNA5SP124-201ENST00000362739 110 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 RNU6-108P-201ENST00000365558 107 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.71□□□□□ -1.66
CNGA1P29973 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.71□□□□□ -1.66
CNGA1P29973 AC002486.1-201ENST00000435098 391 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.71□□□□□ -1.66
CNGA1P29973 RPL26P6-201ENST00000440913 438 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.71□□□□□ -1.66
CNGA1P29973 RNA5SP246-201ENST00000458909 119 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AC023194.1-201ENST00000493084 308 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AL117351.2-201ENST00000513571 157 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 RNU6-314P-201ENST00000516574 104 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 MTND4LP26-201ENST00000518144 282 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 IGKV2-23-201ENST00000518729 323 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.71□□□□□ -1.66
CNGA1P29973 AC008489.1-201ENST00000524271 483 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 AC100770.1-201ENST00000532310 322 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.71□□□□□ -1.66
CNGA1P29973 MTATP6P3-201ENST00000581686 676 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AL121772.2-201ENST00000614331 297 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 U6atac.1-201ENST00000616025 117 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 AL354798.1-201ENST00000622505 329 ntBASIC4.71□□□□□ -1.66
CNGA1P29973 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.71□□□□□ -1.66
CNGA1P29973 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CNGA1P29973 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.71□□□□□ -1.66
CNGA1P29973 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CNGA1P29973 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNGA1P29973 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNGA1P29973 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.7□□□□□ -1.66
CNGA1P29973 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.7□□□□□ -1.66
CNGA1P29973 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNGA1P29973 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CNGA1P29973 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNGA1P29973 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.7□□□□□ -1.66
CNGA1P29973 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNGA1P29973 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNGA1P29973 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNGA1P29973 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CNGA1P29973 SNORA31-201ENST00000362607 130 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 SNORD56.2-201ENST00000363242 71 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 RNU6-1284P-201ENST00000363701 100 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 RNU6-173P-201ENST00000364215 104 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 RNA5SP189-201ENST00000364920 115 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 RNA5SP167-201ENST00000365461 116 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 MIR548F1-201ENST00000408667 84 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.7□□□□□ -1.66
CNGA1P29973 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 AC093578.1-201ENST00000415219 368 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 EIF1P1-201ENST00000421436 341 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 TIMM9P3-201ENST00000428659 274 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.7□□□□□ -1.66
CNGA1P29973 ABCF2P2-201ENST00000450549 296 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 AC004062.1-201ENST00000509926 645 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AF213884.2-201ENST00000510417 903 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.7□□□□□ -1.66
CNGA1P29973 AC011352.1-201ENST00000512300 793 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AC026726.1-201ENST00000512859 601 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 SCARNA24.1-201ENST00000516465 137 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 RNU6-1073P-201ENST00000517182 106 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 AP001893.2-201ENST00000526949 202 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 PHBP17-201ENST00000528576 541 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 AC128657.1-201ENST00000549459 145 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 ARL2BPP2-201ENST00000550907 489 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 SUB1P2-201ENST00000556401 297 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 AC006116.10-201ENST00000591836 581 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AL161756.2-201ENST00000604597 246 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AC092954.2-201ENST00000609103 430 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AC004696.1-201ENST00000614345 607 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms