Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.63□□□□□ -1.51
RXRBP28702 HSPD1P15-201ENST00000505573 1122 ntBASIC5.63□□□□□ -1.51
RXRBP28702 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.63□□□□□ -1.51
RXRBP28702 AC093853.1-201ENST00000515689 483 ntBASIC5.63□□□□□ -1.51
RXRBP28702 RNU6-988P-201ENST00000519081 107 ntBASIC5.63□□□□□ -1.51
RXRBP28702 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.63□□□□□ -1.51
RXRBP28702 IGKV2-36-201ENST00000519999 223 ntBASIC5.63□□□□□ -1.51
RXRBP28702 AP001804.3-201ENST00000525146 880 ntBASIC5.63□□□□□ -1.51
RXRBP28702 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.63□□□□□ -1.51
RXRBP28702 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.63□□□□□ -1.51
RXRBP28702 AC098848.2-201ENST00000588023 330 ntBASIC5.63□□□□□ -1.51
RXRBP28702 AP001029.3-201ENST00000588063 596 ntBASIC5.63□□□□□ -1.51
RXRBP28702 CYP2C61P-201ENST00000604072 290 ntBASIC5.63□□□□□ -1.51
RXRBP28702 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.63□□□□□ -1.51
RXRBP28702 RMST_9.1-201ENST00000619945 193 ntBASIC5.63□□□□□ -1.51
RXRBP28702 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.63□□□□□ -1.51
RXRBP28702 U4.1-201ENST00000620349 87 ntBASIC5.63□□□□□ -1.51
RXRBP28702 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.63□□□□□ -1.51
RXRBP28702 U6.101-201ENST00000637707 76 ntBASIC5.63□□□□□ -1.51
RXRBP28702 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RXRBP28702 ADAM5-202ENST00000399789 1942 ntBASIC5.62□□□□□ -1.51
RXRBP28702 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RXRBP28702 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.62□□□□□ -1.51
RXRBP28702 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RXRBP28702 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RXRBP28702 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 RNU6-984P-201ENST00000363236 109 ntBASIC5.62□□□□□ -1.51
RXRBP28702 RNU1-20P-201ENST00000363314 162 ntBASIC5.62□□□□□ -1.51
RXRBP28702 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.62□□□□□ -1.51
RXRBP28702 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 RNU6-1222P-201ENST00000384615 107 ntBASIC5.62□□□□□ -1.51
RXRBP28702 MTCYBP4-201ENST00000401524 249 ntBASIC5.62□□□□□ -1.51
RXRBP28702 Y_RNA.618-201ENST00000410949 107 ntBASIC5.62□□□□□ -1.51
RXRBP28702 AL391219.1-201ENST00000422570 483 ntBASIC5.62□□□□□ -1.51
RXRBP28702 AC010881.1-201ENST00000433830 235 ntBASIC5.62□□□□□ -1.51
RXRBP28702 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.62□□□□□ -1.51
RXRBP28702 CBX1P4-201ENST00000439415 457 ntBASIC5.62□□□□□ -1.51
RXRBP28702 AC115115.1-201ENST00000449927 248 ntBASIC5.62□□□□□ -1.51
RXRBP28702 CECR9-201ENST00000453421 199 ntBASIC5.62□□□□□ -1.51
RXRBP28702 RNA5SP246-201ENST00000458909 119 ntBASIC5.62□□□□□ -1.51
RXRBP28702 AC106872.2-201ENST00000494303 480 ntBASIC5.62□□□□□ -1.51
RXRBP28702 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.62□□□□□ -1.51
RXRBP28702 AC004062.1-201ENST00000509926 645 ntBASIC5.62□□□□□ -1.51
RXRBP28702 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.62□□□□□ -1.51
RXRBP28702 AC108471.1-201ENST00000513977 287 ntBASIC5.62□□□□□ -1.51
RXRBP28702 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.62□□□□□ -1.51
RXRBP28702 RNU4-29P-201ENST00000515943 174 ntBASIC5.62□□□□□ -1.51
RXRBP28702 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.62□□□□□ -1.51
RXRBP28702 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 PTP4A1P6-201ENST00000531034 478 ntBASIC5.62□□□□□ -1.51
RXRBP28702 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.62□□□□□ -1.51
RXRBP28702 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.62□□□□□ -1.51
RXRBP28702 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.62□□□□□ -1.51
RXRBP28702 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RXRBP28702 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RXRBP28702 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RXRBP28702 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.61□□□□□ -1.51
RXRBP28702 RNY4P16-201ENST00000364768 94 ntBASIC5.61□□□□□ -1.51
RXRBP28702 RNU6-38P-201ENST00000384085 107 ntBASIC5.61□□□□□ -1.51
RXRBP28702 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.61□□□□□ -1.51
RXRBP28702 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RXRBP28702 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RXRBP28702 MIR548K-201ENST00000408406 116 ntBASIC5.61□□□□□ -1.51
RXRBP28702 RNU4-26P-201ENST00000410270 107 ntBASIC5.61□□□□□ -1.51
RXRBP28702 RPS12P24-201ENST00000412619 387 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AL445487.1-201ENST00000415694 1580 ntBASIC5.61□□□□□ -1.51
RXRBP28702 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.61□□□□□ -1.51
RXRBP28702 AC006548.1-201ENST00000427470 102 ntBASIC5.61□□□□□ -1.51
RXRBP28702 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.61□□□□□ -1.51
RXRBP28702 RPL7L1P10-201ENST00000427790 463 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AC119618.1-201ENST00000434191 222 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AC004938.1-201ENST00000438468 308 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AL138799.3-201ENST00000438968 350 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.61□□□□□ -1.51
RXRBP28702 AP004289.2-201ENST00000444413 1457 ntBASIC5.61□□□□□ -1.51
RXRBP28702 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.61□□□□□ -1.51
RXRBP28702 MRPS31P2-201ENST00000451581 518 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.61□□□□□ -1.51
RXRBP28702 RPL23AP81-201ENST00000455252 467 ntBASIC5.61□□□□□ -1.51
RXRBP28702 RNU6-333P-201ENST00000459117 107 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AC016559.2-201ENST00000510759 359 ntBASIC5.61□□□□□ -1.51
RXRBP28702 RNU6-864P-201ENST00000516256 108 ntBASIC5.61□□□□□ -1.51
RXRBP28702 SNORD27.1-201ENST00000516319 72 ntBASIC5.61□□□□□ -1.51
RXRBP28702 RNA5SP337-201ENST00000517007 109 ntBASIC5.61□□□□□ -1.51
RXRBP28702 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RXRBP28702 CYCSP30-201ENST00000546447 172 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.61□□□□□ -1.51
RXRBP28702 AC092125.1-201ENST00000562568 1995 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AL356432.3-201ENST00000568952 465 ntBASIC5.61□□□□□ -1.51
RXRBP28702 MIR3942-201ENST00000585264 109 ntBASIC5.61□□□□□ -1.51
RXRBP28702 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.61□□□□□ -1.51
RXRBP28702 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms