Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
BDNFP23560 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.7□□□□□ -1.82
BDNFP23560 AC087373.1-201ENST00000524920 491 ntBASIC3.7□□□□□ -1.82
BDNFP23560 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BDNFP23560 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.7□□□□□ -1.82
BDNFP23560 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.7□□□□□ -1.82
BDNFP23560 AL035413.2-201ENST00000604801 525 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AC012468.1-201ENST00000604888 430 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AC239868.4-201ENST00000608318 671 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AL391262.2-201ENST00000622466 494 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.7□□□□□ -1.82
BDNFP23560 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.7□□□□□ -1.82
BDNFP23560 CR381670.1-201ENST00000624291 1693 ntBASIC3.7□□□□□ -1.82
BDNFP23560 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BDNFP23560 RIOK3P1-201ENST00000418778 1528 ntBASIC3.7□□□□□ -1.82
BDNFP23560 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BDNFP23560 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BDNFP23560 API5P2-201ENST00000397055 1498 ntBASIC3.69□□□□□ -1.82
BDNFP23560 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
BDNFP23560 RPL21P132-201ENST00000331267 462 ntBASIC3.69□□□□□ -1.82
BDNFP23560 RNU6-270P-201ENST00000364131 105 ntBASIC3.69□□□□□ -1.82
BDNFP23560 RNU6-217P-201ENST00000384164 104 ntBASIC3.69□□□□□ -1.82
BDNFP23560 RNU6-83P-201ENST00000384568 112 ntBASIC3.69□□□□□ -1.82
BDNFP23560 CCNG1P1-201ENST00000406783 885 ntBASIC3.69□□□□□ -1.82
BDNFP23560 RN7SKP220-201ENST00000410611 288 ntBASIC3.69□□□□□ -1.82
BDNFP23560 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.69□□□□□ -1.82
BDNFP23560 AP000907.1-201ENST00000428428 510 ntBASIC3.69□□□□□ -1.82
BDNFP23560 SKP1P1-201ENST00000438081 489 ntBASIC3.69□□□□□ -1.82
BDNFP23560 AL714022.1-201ENST00000439897 151 ntBASIC3.69□□□□□ -1.82
BDNFP23560 GAPDHP27-201ENST00000447427 1020 ntBASIC3.69□□□□□ -1.82
BDNFP23560 AC013267.1-201ENST00000458227 267 ntBASIC3.69□□□□□ -1.82
BDNFP23560 RPL21P10-201ENST00000463521 490 ntBASIC3.69□□□□□ -1.82
BDNFP23560 AC116337.2-201ENST00000477662 156 ntBASIC3.69□□□□□ -1.82
BDNFP23560 ARL4AP2-201ENST00000507378 601 ntBASIC3.69□□□□□ -1.82
BDNFP23560 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.69□□□□□ -1.82
BDNFP23560 AC074250.1-201ENST00000511117 192 ntBASIC3.69□□□□□ -1.82
BDNFP23560 RNU6-390P-201ENST00000516259 103 ntBASIC3.69□□□□□ -1.82
BDNFP23560 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.69□□□□□ -1.82
BDNFP23560 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.69□□□□□ -1.82
BDNFP23560 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.69□□□□□ -1.82
BDNFP23560 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.69□□□□□ -1.82
BDNFP23560 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.69□□□□□ -1.82
BDNFP23560 AL450336.1-201ENST00000605180 586 ntBASIC3.69□□□□□ -1.82
BDNFP23560 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.69□□□□□ -1.82
BDNFP23560 AL355365.1-201ENST00000616480 294 ntBASIC3.69□□□□□ -1.82
BDNFP23560 MTND1P37-201ENST00000636562 264 ntBASIC3.69□□□□□ -1.82
BDNFP23560 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
BDNFP23560 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
BDNFP23560 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BDNFP23560 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.69□□□□□ -1.82
BDNFP23560 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
BDNFP23560 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.69□□□□□ -1.82
BDNFP23560 Z83843.1-201ENST00000604070 3685 ntBASIC3.68□□□□□ -1.82
BDNFP23560 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BDNFP23560 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
BDNFP23560 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
BDNFP23560 RNA5SP387-201ENST00000364226 106 ntBASIC3.68□□□□□ -1.82
BDNFP23560 RNU6-283P-201ENST00000364788 107 ntBASIC3.68□□□□□ -1.82
BDNFP23560 RNA5SP88-201ENST00000365560 109 ntBASIC3.68□□□□□ -1.82
BDNFP23560 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.68□□□□□ -1.82
BDNFP23560 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.68□□□□□ -1.82
BDNFP23560 RNVU1-14-201ENST00000384770 164 ntBASIC3.68□□□□□ -1.82
BDNFP23560 MIR34B-201ENST00000385076 84 ntBASIC3.68□□□□□ -1.82
BDNFP23560 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.68□□□□□ -1.82
BDNFP23560 AL391417.1-201ENST00000404100 426 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC006989.1-201ENST00000427212 131 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.68□□□□□ -1.82
BDNFP23560 RSU1P2-202ENST00000437884 485 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.68□□□□□ -1.82
BDNFP23560 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.68□□□□□ -1.82
BDNFP23560 ELOCP30-201ENST00000447108 299 ntBASIC3.68□□□□□ -1.82
BDNFP23560 MTCO3P20-201ENST00000454926 688 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.68□□□□□ -1.82
BDNFP23560 AC008155.2-201ENST00000464337 397 ntBASIC3.68□□□□□ -1.82
BDNFP23560 RN7SL594P-201ENST00000470590 287 ntBASIC3.68□□□□□ -1.82
BDNFP23560 KC877373.1-201ENST00000479066 408 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC026784.1-201ENST00000507986 352 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.68□□□□□ -1.82
BDNFP23560 RNU2-27P-201ENST00000516185 142 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AP000857.1-201ENST00000532151 543 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC023538.1-201ENST00000534576 736 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC093012.1-202ENST00000549403 582 ntBASIC3.68□□□□□ -1.82
BDNFP23560 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
BDNFP23560 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.68□□□□□ -1.82
BDNFP23560 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.68□□□□□ -1.82
BDNFP23560 AC068135.2-201ENST00000569293 1028 ntBASIC3.68□□□□□ -1.82
BDNFP23560 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.68□□□□□ -1.82
BDNFP23560 AC008739.2-201ENST00000597006 317 ntBASIC3.68□□□□□ -1.82
BDNFP23560 BNIP3P23-201ENST00000599655 511 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC068790.3-201ENST00000602988 553 ntBASIC3.68□□□□□ -1.82
BDNFP23560 AC011458.1-201ENST00000604034 617 ntBASIC3.68□□□□□ -1.82
BDNFP23560 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
BDNFP23560 AL356596.1-201ENST00000624230 379 ntBASIC3.68□□□□□ -1.82
BDNFP23560 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
BDNFP23560 MTND5P7-201ENST00000413558 1798 ntBASIC3.68□□□□□ -1.82
BDNFP23560 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.68□□□□□ -1.82
BDNFP23560 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
BDNFP23560 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BDNFP23560 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BDNFP23560 RNA5SP72-201ENST00000364442 117 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms