Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNA3P22001 ZNF519P2-201ENST00000557032 169 ntBASIC4.36□□□□□ -1.71
KCNA3P22001 AL157394.1-201ENST00000562983 1224 ntBASIC4.36□□□□□ -1.71
KCNA3P22001 AC090615.1-201ENST00000577519 154 ntBASIC4.36□□□□□ -1.71
KCNA3P22001 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.36□□□□□ -1.71
KCNA3P22001 AL161729.4-201ENST00000604650 476 ntBASIC4.36□□□□□ -1.71
KCNA3P22001 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.36□□□□□ -1.71
KCNA3P22001 U4.5-201ENST00000617137 123 ntBASIC4.36□□□□□ -1.71
KCNA3P22001 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.36□□□□□ -1.71
KCNA3P22001 AC138649.3-201ENST00000622154 254 ntBASIC4.36□□□□□ -1.71
KCNA3P22001 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KCNA3P22001 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
KCNA3P22001 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KCNA3P22001 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KCNA3P22001 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
KCNA3P22001 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KCNA3P22001 AC019155.1-201ENST00000382242 574 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 RN7SKP111-201ENST00000410349 271 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 RNA5SP306-201ENST00000411087 107 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.35□□□□□ -1.71
KCNA3P22001 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNA3P22001 AL138785.1-201ENST00000425821 331 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AL158071.1-201ENST00000430315 461 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNA3P22001 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.35□□□□□ -1.71
KCNA3P22001 RPL7P52-201ENST00000449200 742 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 GAPDHP17-201ENST00000449858 1001 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNA3P22001 RPS20P32-201ENST00000456044 356 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 RPL21P8-201ENST00000465083 535 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNA3P22001 RPL9P6-201ENST00000492764 598 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AC091133.4-201ENST00000511142 308 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AC022483.1-201ENST00000514020 567 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
KCNA3P22001 PTP4A1P6-201ENST00000531034 478 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AC034105.3-201ENST00000565294 442 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.35□□□□□ -1.71
KCNA3P22001 OR4G1P-201ENST00000588632 938 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 VN1R79P-201ENST00000593540 513 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AC073534.2-201ENST00000620377 381 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 PISRT1-201ENST00000626175 531 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 AC110994.2-201ENST00000635481 492 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 MIR4496-201ENST00000635896 61 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KCNA3P22001 OR5H6-203ENST00000642105 978 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.35□□□□□ -1.71
KCNA3P22001 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KCNA3P22001 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 AC095050.2-201ENST00000510748 1458 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 LINC02471-203ENST00000641941 4752 ntBASIC4.35□□□□□ -1.71
KCNA3P22001 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
KCNA3P22001 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
KCNA3P22001 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KCNA3P22001 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNA3P22001 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNA3P22001 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNA3P22001 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNA3P22001 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
KCNA3P22001 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNA3P22001 Y_RNA.46-201ENST00000362695 102 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 AL357075.1-201ENST00000404107 726 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNA3P22001 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNA3P22001 NDUFB1P1-201ENST00000435191 180 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 RPL17P49-201ENST00000443728 411 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNA3P22001 snoU13.8-201ENST00000458890 104 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 AC004924.1-201ENST00000480160 781 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNA3P22001 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNA3P22001 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNA3P22001 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNA3P22001 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNA3P22001 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNA3P22001 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNA3P22001 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNA3P22001 AC067852.4-201ENST00000590314 478 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 AC020914.4-201ENST00000597690 277 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.34□□□□□ -1.71
KCNA3P22001 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 AL596245.1-201ENST00000618994 362 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNA3P22001 AL732618.1-201ENST00000623251 301 ntBASIC4.34□□□□□ -1.71
KCNA3P22001 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.34□□□□□ -1.71
KCNA3P22001 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.34□□□□□ -1.71
KCNA3P22001 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
KCNA3P22001 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KCNA3P22001 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.33□□□□□ -1.72
KCNA3P22001 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KCNA3P22001 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KCNA3P22001 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms