Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC096586.1-201ENST00000610267 561 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 MIR3670-4-201ENST00000612260 65 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC011330.2-201ENST00000621680 635 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.17□□□□□ -2.06
COL5A1P20908 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC019226.2-201ENST00000625973 424 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.17□□□□□ -2.06
COL5A1P20908 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
COL5A1P20908 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
COL5A1P20908 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 AC000367.1-201ENST00000452711 1766 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC006378.2-201ENST00000623178 2476 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 RNU6-236P-201ENST00000363886 106 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 RNA5SP88-201ENST00000365560 109 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.17□□□□□ -2.06
COL5A1P20908 RNU6-225P-201ENST00000384613 103 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AL603865.2-201ENST00000401679 213 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AL354719.1-201ENST00000406535 843 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 SSR1P2-201ENST00000415208 787 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 AC005005.2-201ENST00000420779 380 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC246680.2-201ENST00000422106 389 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 CETN4P-201ENST00000432407 469 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.17□□□□□ -2.06
COL5A1P20908 DUXAP8-207ENST00000456786 622 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL5A1P20908 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.17□□□□□ -2.06
COL5A1P20908 AL132857.1-201ENST00000555180 708 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 MTND3P12-201ENST00000559068 328 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AGGF1P5-201ENST00000567900 919 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.17□□□□□ -2.06
COL5A1P20908 AC011494.1-201ENST00000596454 237 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 DUXAP10-204ENST00000612052 616 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 AC145207.9-201ENST00000623802 325 ntBASIC2.17□□□□□ -2.06
COL5A1P20908 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL5A1P20908 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL5A1P20908 AC011460.1-201ENST00000636268 1834 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL5A1P20908 AL139811.1-201ENST00000424779 2299 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AL359893.1-201ENST00000447628 1580 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COL5A1P20908 MIR518E-201ENST00000385252 88 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 RPL7P27-201ENST00000403775 720 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AC013404.1-201ENST00000413068 249 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 RPS24P7-201ENST00000416921 246 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 MTND4P3-201ENST00000417829 541 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 LINC01347-201ENST00000417964 355 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AC092832.1-201ENST00000422934 400 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 XKRYP1-201ENST00000423438 492 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 XKRYP2-201ENST00000432915 492 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL5A1P20908 AL358794.1-201ENST00000445689 381 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AC009961.3-201ENST00000449832 765 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.16□□□□□ -2.06
COL5A1P20908 MTCO3P11-201ENST00000455103 774 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AL139824.2-201ENST00000458731 1095 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 MTCO2P6-201ENST00000463134 685 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.16□□□□□ -2.06
COL5A1P20908 RN7SKP287-201ENST00000516546 266 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 RNU6-347P-201ENST00000516658 105 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 RNU6-295P-201ENST00000516901 104 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 SMARCE1P4-201ENST00000523647 241 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 NDUFS5P6-201ENST00000529136 295 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.16□□□□□ -2.06
COL5A1P20908 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.16□□□□□ -2.06
COL5A1P20908 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.16□□□□□ -2.06
COL5A1P20908 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.16□□□□□ -2.06
COL5A1P20908 AL160237.3-201ENST00000604114 1013 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AC106052.1-201ENST00000608029 497 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AC017104.5-201ENST00000637647 639 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AL353746.1-201ENST00000566293 6881 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AC099786.3-201ENST00000565735 1410 ntBASIC2.16□□□□□ -2.06
COL5A1P20908 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.16□□□□□ -2.06
COL5A1P20908 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL5A1P20908 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
COL5A1P20908 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL5A1P20908 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
COL5A1P20908 Y_RNA.116-201ENST00000363292 103 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 RNU6-560P-201ENST00000364007 108 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 MTCO1P56-201ENST00000401674 224 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AL034374.1-201ENST00000406329 351 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AC096533.1-201ENST00000411645 353 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 MTCO2P21-201ENST00000419780 677 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 MTCO3P21-201ENST00000430791 643 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.15□□□□□ -2.06
COL5A1P20908 MTND1P33-201ENST00000446251 917 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms