Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.28□□□□□ -1.72
COL11A2P13942 IGKV2-26-201ENST00000518305 343 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.28□□□□□ -1.72
COL11A2P13942 AP003467.2-201ENST00000520175 319 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.28□□□□□ -1.72
COL11A2P13942 AP006245.1-201ENST00000522549 120 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 AC013828.2-201ENST00000532487 235 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.28□□□□□ -1.72
COL11A2P13942 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.28□□□□□ -1.72
COL11A2P13942 AL121821.2-201ENST00000556081 394 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.28□□□□□ -1.72
COL11A2P13942 AL845331.3-202ENST00000562856 261 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 TPMTP1-201ENST00000592307 737 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.28□□□□□ -1.72
COL11A2P13942 VN1R80P-201ENST00000597126 338 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 AC112191.3-201ENST00000604371 277 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.28□□□□□ -1.72
COL11A2P13942 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL11A2P13942 AC006504.8-201ENST00000621046 635 ntBASIC4.28□□□□□ -1.72
COL11A2P13942 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.28□□□□□ -1.72
COL11A2P13942 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A2P13942 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL11A2P13942 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.27□□□□□ -1.73
COL11A2P13942 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.27□□□□□ -1.73
COL11A2P13942 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL11A2P13942 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 RNU6-738P-201ENST00000384531 106 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 MIR1305-201ENST00000408300 86 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 RN7SKP266-201ENST00000410232 287 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 RN7SKP222-201ENST00000410651 315 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 RNU6-272P-201ENST00000411028 104 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AC004987.3-201ENST00000413879 771 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.27□□□□□ -1.73
COL11A2P13942 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.27□□□□□ -1.73
COL11A2P13942 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.27□□□□□ -1.73
COL11A2P13942 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.27□□□□□ -1.73
COL11A2P13942 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.27□□□□□ -1.73
COL11A2P13942 RPS4XP2-201ENST00000458402 793 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.27□□□□□ -1.73
COL11A2P13942 RPL23AP71-201ENST00000470966 469 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.27□□□□□ -1.73
COL11A2P13942 AC020893.1-201ENST00000502452 580 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AC139783.2-201ENST00000504847 1145 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 RNU6-1281P-201ENST00000516223 105 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.27□□□□□ -1.73
COL11A2P13942 PSMA3P-201ENST00000555485 635 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AL157394.1-201ENST00000562983 1224 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 MIR3167-201ENST00000579623 85 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.27□□□□□ -1.73
COL11A2P13942 AL451049.1-201ENST00000608672 497 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.27□□□□□ -1.73
COL11A2P13942 AC068722.2-201ENST00000618734 544 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AC139792.3-201ENST00000623525 224 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.27□□□□□ -1.73
COL11A2P13942 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.27□□□□□ -1.73
COL11A2P13942 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.27□□□□□ -1.73
COL11A2P13942 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.27□□□□□ -1.73
COL11A2P13942 AC107021.2-201ENST00000567714 2095 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
COL11A2P13942 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL11A2P13942 AL512646.1-201ENST00000269395 1077 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 SNORD81.2-201ENST00000365153 76 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A2P13942 RN7SKP32-201ENST00000410167 303 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 RNU2-8P-201ENST00000410727 190 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 RNU6-373P-201ENST00000411247 98 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AL359704.1-201ENST00000411586 781 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A2P13942 BX842559.1-201ENST00000419615 532 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 SNRPEP10-201ENST00000420249 274 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 IFNA20P-201ENST00000436840 528 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A2P13942 AC079448.1-201ENST00000449377 373 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 HMGB1P21-201ENST00000502313 581 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AC112204.1-201ENST00000502591 103 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 RNU6-579P-201ENST00000516879 102 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AC027309.2-201ENST00000520566 192 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 HSPA8P13-201ENST00000523715 472 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A2P13942 AC078814.3-201ENST00000553036 491 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 HIF1AP1-201ENST00000553642 175 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A2P13942 AC107954.1-201ENST00000565906 727 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.26□□□□□ -1.73
COL11A2P13942 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A2P13942 MIR4513-201ENST00000581077 86 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.26□□□□□ -1.73
COL11A2P13942 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A2P13942 AC018638.8-201ENST00000588755 281 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.26□□□□□ -1.73
COL11A2P13942 AC073657.2-201ENST00000605661 303 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AL162730.1-201ENST00000605734 292 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 AL365204.3-201ENST00000612448 685 ntBASIC4.26□□□□□ -1.73
COL11A2P13942 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.26□□□□□ -1.73
COL11A2P13942 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A2P13942 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A2P13942 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A2P13942 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL11A2P13942 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL11A2P13942 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms