Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 MIR544B-201ENST00000582372 78 ntBASIC3.73□□□□□ -1.81
ACTN1P12814 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.73□□□□□ -1.81
ACTN1P12814 AL031176.1-201ENST00000604554 466 ntBASIC3.73□□□□□ -1.81
ACTN1P12814 AL592295.2-201ENST00000612578 206 ntBASIC3.73□□□□□ -1.81
ACTN1P12814 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.73□□□□□ -1.81
ACTN1P12814 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.73□□□□□ -1.81
ACTN1P12814 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.73□□□□□ -1.81
ACTN1P12814 AL035425.3-201ENST00000564206 4996 ntBASIC3.73□□□□□ -1.81
ACTN1P12814 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
ACTN1P12814 AC004944.1-201ENST00000517807 3059 ntBASIC3.73□□□□□ -1.81
ACTN1P12814 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
ACTN1P12814 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ACTN1P12814 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.72□□□□□ -1.81
ACTN1P12814 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.72□□□□□ -1.81
ACTN1P12814 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ACTN1P12814 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ACTN1P12814 MIR422A-201ENST00000362286 90 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 RNU6-500P-201ENST00000362349 107 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 RNA5SP197-201ENST00000363357 119 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 RNU6-97P-201ENST00000363387 104 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 MTCO1P17-201ENST00000411522 491 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 TPMTP3-201ENST00000411928 735 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.72□□□□□ -1.81
ACTN1P12814 Z99755.1-201ENST00000414048 380 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 MTCO3P12-201ENST00000416718 547 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.72□□□□□ -1.81
ACTN1P12814 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.72□□□□□ -1.81
ACTN1P12814 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.72□□□□□ -1.81
ACTN1P12814 VDAC1P3-201ENST00000434069 851 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 LARP1BP3-201ENST00000437229 869 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 NANOGNBP1-201ENST00000448444 480 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AP000542.1-201ENST00000448473 371 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.72□□□□□ -1.81
ACTN1P12814 RPL30P6-201ENST00000475925 342 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 RPL21P13-201ENST00000488305 481 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC106872.3-201ENST00000495104 446 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 OR2A20P-203ENST00000498397 1268 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.72□□□□□ -1.81
ACTN1P12814 TXNP6-201ENST00000510190 310 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC010486.3-201ENST00000511602 785 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC017037.2-201ENST00000513850 890 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 RNU6-1073P-201ENST00000517182 106 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AP004247.1-201ENST00000531556 1289 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.72□□□□□ -1.81
ACTN1P12814 SYF2P1-201ENST00000550658 413 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.72□□□□□ -1.81
ACTN1P12814 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.72□□□□□ -1.81
ACTN1P12814 AC034268.2-201ENST00000571784 482 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 OR4K8P-201ENST00000578842 1048 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.72□□□□□ -1.81
ACTN1P12814 WISP1-OT1-201ENST00000602893 642 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC006254.3-201ENST00000603353 884 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 Z99497.2-201ENST00000603634 310 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AC008443.7-201ENST00000622195 246 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 AL356585.4-201ENST00000623078 1229 ntBASIC3.72□□□□□ -1.81
ACTN1P12814 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ACTN1P12814 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
ACTN1P12814 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
ACTN1P12814 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ACTN1P12814 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
ACTN1P12814 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.72□□□□□ -1.81
ACTN1P12814 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ACTN1P12814 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ACTN1P12814 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.71□□□□□ -1.82
ACTN1P12814 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.71□□□□□ -1.82
ACTN1P12814 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ACTN1P12814 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ACTN1P12814 FRG1BP-201ENST00000278882 761 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 RNU5F-7P-201ENST00000363696 115 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 RNU1-140P-201ENST00000365040 165 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 MIR591-201ENST00000385290 95 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ACTN1P12814 AL357075.1-201ENST00000404107 726 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AL021407.1-201ENST00000404531 386 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AL138885.1-201ENST00000405921 675 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 RNU6-55P-201ENST00000411092 107 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 RNU6-954P-201ENST00000411355 107 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 RNU2-71P-201ENST00000411395 189 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AC109780.2-201ENST00000413467 845 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 RPL23AP39-201ENST00000415533 405 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 USP9YP36-201ENST00000424581 829 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AL445669.1-201ENST00000426743 755 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.71□□□□□ -1.82
ACTN1P12814 FTH1P25-201ENST00000447665 469 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 OR6K1P-201ENST00000456766 971 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.71□□□□□ -1.82
ACTN1P12814 AC112198.1-201ENST00000505369 1220 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 POU5F1P7-201ENST00000508759 541 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AC004062.1-201ENST00000509926 645 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.71□□□□□ -1.82
ACTN1P12814 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.71□□□□□ -1.82
ACTN1P12814 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.71□□□□□ -1.82
ACTN1P12814 AC022146.1-201ENST00000595307 847 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AC106028.5-201ENST00000610332 395 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 AL590240.3-201ENST00000621416 943 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 PLCE1P1-201ENST00000622094 305 ntBASIC3.71□□□□□ -1.82
ACTN1P12814 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms