Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC011753.1-201ENST00000451001 220 ntBASIC2.63□□□□□ -1.99
TPM1P09493 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM1P09493 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM1P09493 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM1P09493 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM1P09493 HMGB3P3-201ENST00000510526 400 ntBASIC2.63□□□□□ -1.99
TPM1P09493 TTC39CP1-201ENST00000512513 755 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM1P09493 RN7SKP24-201ENST00000515888 284 ntBASIC2.63□□□□□ -1.99
TPM1P09493 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.63□□□□□ -1.99
TPM1P09493 RNU6-1282P-201ENST00000516735 96 ntBASIC2.63□□□□□ -1.99
TPM1P09493 COX6CP8-201ENST00000522620 226 ntBASIC2.63□□□□□ -1.99
TPM1P09493 ATP5F1P5-201ENST00000526403 760 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM1P09493 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TPM1P09493 MTCO1P40-201ENST00000574371 625 ntBASIC2.63□□□□□ -1.99
TPM1P09493 ISCA1P3-201ENST00000577104 373 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM1P09493 MIR5195-201ENST00000583555 115 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AC061975.8-201ENST00000587058 721 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM1P09493 AC067747.1-201ENST00000608026 250 ntBASIC2.63□□□□□ -1.99
TPM1P09493 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TPM1P09493 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.63□□□□□ -1.99
TPM1P09493 AL592148.2-201ENST00000612210 372 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AC006213.4-201ENST00000616184 634 ntBASIC2.63□□□□□ -1.99
TPM1P09493 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TPM1P09493 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TPM1P09493 ZNF720P1-201ENST00000562403 1939 ntBASIC2.62□□□□□ -1.99
TPM1P09493 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TPM1P09493 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM1P09493 SPA17P1-201ENST00000416656 452 ntBASIC2.62□□□□□ -1.99
TPM1P09493 MTND1P23-201ENST00000416931 372 ntBASIC2.62□□□□□ -1.99
TPM1P09493 AC099548.1-201ENST00000421443 426 ntBASIC2.62□□□□□ -1.99
TPM1P09493 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.62□□□□□ -1.99
TPM1P09493 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM1P09493 AL512844.2-201ENST00000433990 593 ntBASIC2.62□□□□□ -1.99
TPM1P09493 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM1P09493 AP000936.2-201ENST00000447151 681 ntBASIC2.62□□□□□ -1.99
TPM1P09493 SNORD109B-201ENST00000458961 67 ntBASIC2.62□□□□□ -1.99
TPM1P09493 SNORD109A-201ENST00000459128 67 ntBASIC2.62□□□□□ -1.99
TPM1P09493 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM1P09493 AC034159.1-201ENST00000513885 583 ntBASIC2.62□□□□□ -1.99
TPM1P09493 SNORA31.18-201ENST00000517043 134 ntBASIC2.62□□□□□ -1.99
TPM1P09493 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
TPM1P09493 AP000916.1-201ENST00000533869 835 ntBASIC2.62□□□□□ -1.99
TPM1P09493 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.62□□□□□ -1.99
TPM1P09493 AC078814.3-201ENST00000553036 491 ntBASIC2.62□□□□□ -1.99
TPM1P09493 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM1P09493 AC025281.1-201ENST00000567026 265 ntBASIC2.62□□□□□ -1.99
TPM1P09493 AC105137.2-201ENST00000569073 466 ntBASIC2.62□□□□□ -1.99
TPM1P09493 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.62□□□□□ -1.99
TPM1P09493 KATNBL1P5-201ENST00000605015 517 ntBASIC2.62□□□□□ -1.99
TPM1P09493 VN1R9P-201ENST00000614184 867 ntBASIC2.62□□□□□ -1.99
TPM1P09493 HMGB1P24-202ENST00000615653 685 ntBASIC2.62□□□□□ -1.99
TPM1P09493 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TPM1P09493 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
TPM1P09493 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TPM1P09493 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.61□□□□□ -1.99
TPM1P09493 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
TPM1P09493 AL445183.3-201ENST00000414168 502 ntBASIC2.61□□□□□ -1.99
TPM1P09493 Z85995.1-201ENST00000415547 335 ntBASIC2.61□□□□□ -1.99
TPM1P09493 Z75741.2-201ENST00000417272 1167 ntBASIC2.61□□□□□ -1.99
TPM1P09493 KRR1P1-201ENST00000419430 803 ntBASIC2.61□□□□□ -1.99
TPM1P09493 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM1P09493 AC246680.2-201ENST00000422106 389 ntBASIC2.61□□□□□ -1.99
TPM1P09493 NDUFB4P7-201ENST00000423198 363 ntBASIC2.61□□□□□ -1.99
TPM1P09493 AL590383.1-201ENST00000428602 75 ntBASIC2.61□□□□□ -1.99
TPM1P09493 AL356867.1-201ENST00000429623 299 ntBASIC2.61□□□□□ -1.99
TPM1P09493 ARL5AP4-201ENST00000430731 512 ntBASIC2.61□□□□□ -1.99
TPM1P09493 GTF2IP20-201ENST00000431663 360 ntBASIC2.61□□□□□ -1.99
TPM1P09493 COX6CP12-201ENST00000446748 202 ntBASIC2.61□□□□□ -1.99
TPM1P09493 RNU7-26P-201ENST00000458980 63 ntBASIC2.61□□□□□ -1.99
TPM1P09493 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TPM1P09493 COX7A2P2-201ENST00000505291 250 ntBASIC2.61□□□□□ -1.99
TPM1P09493 NDUFB4P2-201ENST00000509515 391 ntBASIC2.61□□□□□ -1.99
TPM1P09493 XKRY-201ENST00000510392 1100 ntBASIC2.61□□□□□ -1.99
TPM1P09493 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.61□□□□□ -1.99
TPM1P09493 AC109329.2-201ENST00000519658 482 ntBASIC2.61□□□□□ -1.99
TPM1P09493 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM1P09493 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM1P09493 AC113192.3-201ENST00000529152 742 ntBASIC2.61□□□□□ -1.99
TPM1P09493 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.61□□□□□ -1.99
TPM1P09493 MIR3616-201ENST00000584070 92 ntBASIC2.61□□□□□ -1.99
TPM1P09493 AC013553.2-201ENST00000604244 589 ntBASIC2.61□□□□□ -1.99
TPM1P09493 TUG1_1.1-201ENST00000610654 145 ntBASIC2.61□□□□□ -1.99
TPM1P09493 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
TPM1P09493 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.61□□□□□ -1.99
TPM1P09493 ZNF849P-201ENST00000594711 1566 ntBASIC2.61□□□□□ -1.99
TPM1P09493 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPM1P09493 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM1P09493 RNA5SP37-201ENST00000365420 130 ntBASIC2.6□□□□□ -1.99
TPM1P09493 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPM1P09493 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
TPM1P09493 MIR325-201ENST00000385260 98 ntBASIC2.6□□□□□ -1.99
TPM1P09493 AL136133.1-201ENST00000413694 376 ntBASIC2.6□□□□□ -1.99
TPM1P09493 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM1P09493 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.6□□□□□ -1.99
TPM1P09493 MTCO3P30-201ENST00000426425 670 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms