Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.57□□□□□ -1.84
LDLRP01130 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LDLRP01130 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.57□□□□□ -1.84
LDLRP01130 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.57□□□□□ -1.84
LDLRP01130 AC245505.1-201ENST00000556398 224 ntBASIC3.57□□□□□ -1.84
LDLRP01130 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AP001004.1-201ENST00000582468 324 ntBASIC3.57□□□□□ -1.84
LDLRP01130 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 KLKP1-201ENST00000595979 403 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AC011451.2-201ENST00000604303 598 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AC017083.3-201ENST00000609955 700 ntBASIC3.57□□□□□ -1.84
LDLRP01130 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
LDLRP01130 MIR7844-201ENST00000616161 122 ntBASIC3.57□□□□□ -1.84
LDLRP01130 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.57□□□□□ -1.84
LDLRP01130 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LDLRP01130 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDLRP01130 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
LDLRP01130 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDLRP01130 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 Y_RNA.88-201ENST00000363029 99 ntBASIC3.56□□□□□ -1.84
LDLRP01130 RNU6-694P-201ENST00000364071 147 ntBASIC3.56□□□□□ -1.84
LDLRP01130 RNU6-744P-201ENST00000365557 107 ntBASIC3.56□□□□□ -1.84
LDLRP01130 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 RNU6-1316P-201ENST00000384242 108 ntBASIC3.56□□□□□ -1.84
LDLRP01130 RNU2-66P-201ENST00000410650 161 ntBASIC3.56□□□□□ -1.84
LDLRP01130 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 AC007899.1-201ENST00000412776 775 ntBASIC3.56□□□□□ -1.84
LDLRP01130 EI24P1-201ENST00000416584 867 ntBASIC3.56□□□□□ -1.84
LDLRP01130 Z99497.1-201ENST00000421282 135 ntBASIC3.56□□□□□ -1.84
LDLRP01130 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.56□□□□□ -1.84
LDLRP01130 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 AC006548.1-201ENST00000427470 102 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AC104651.1-201ENST00000427559 735 ntBASIC3.56□□□□□ -1.84
LDLRP01130 RPL21P112-201ENST00000434403 463 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LDLRP01130 AL512286.1-201ENST00000439244 400 ntBASIC3.56□□□□□ -1.84
LDLRP01130 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 FTH1P25-201ENST00000447665 469 ntBASIC3.56□□□□□ -1.84
LDLRP01130 EPS15P1-201ENST00000448836 336 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AC093392.2-201ENST00000450682 337 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AC027673.1-201ENST00000456245 405 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 snoU13.3-201ENST00000459441 104 ntBASIC3.56□□□□□ -1.84
LDLRP01130 RPL21P11-201ENST00000461458 483 ntBASIC3.56□□□□□ -1.84
LDLRP01130 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 FABP5P5-201ENST00000515537 406 ntBASIC3.56□□□□□ -1.84
LDLRP01130 RN7SKP60-201ENST00000516985 239 ntBASIC3.56□□□□□ -1.84
LDLRP01130 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.56□□□□□ -1.84
LDLRP01130 EEF1B2P4-201ENST00000551398 348 ntBASIC3.56□□□□□ -1.84
LDLRP01130 PCMTD1P2-201ENST00000565017 355 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 MIR544B-201ENST00000582372 78 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AC008507.1-201ENST00000587506 734 ntBASIC3.56□□□□□ -1.84
LDLRP01130 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.56□□□□□ -1.84
LDLRP01130 AC025594.3-201ENST00000613068 790 ntBASIC3.56□□□□□ -1.84
LDLRP01130 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.56□□□□□ -1.84
LDLRP01130 CR381572.1-201ENST00000625098 102 ntBASIC3.56□□□□□ -1.84
LDLRP01130 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.56□□□□□ -1.84
LDLRP01130 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDLRP01130 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDLRP01130 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LDLRP01130 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDLRP01130 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDLRP01130 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.55□□□□□ -1.84
LDLRP01130 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
LDLRP01130 RNA5SP258-201ENST00000362750 119 ntBASIC3.55□□□□□ -1.84
LDLRP01130 RNU6-1249P-201ENST00000363237 111 ntBASIC3.55□□□□□ -1.84
LDLRP01130 RNU6-501P-201ENST00000364072 100 ntBASIC3.55□□□□□ -1.84
LDLRP01130 Y_RNA.248-201ENST00000364501 109 ntBASIC3.55□□□□□ -1.84
LDLRP01130 MIR199A2-201ENST00000385289 110 ntBASIC3.55□□□□□ -1.84
LDLRP01130 MTCYBP36-201ENST00000404146 440 ntBASIC3.55□□□□□ -1.84
LDLRP01130 MIR548F1-201ENST00000408667 84 ntBASIC3.55□□□□□ -1.84
LDLRP01130 SNORA3.3-201ENST00000408712 125 ntBASIC3.55□□□□□ -1.84
LDLRP01130 RNU2-47P-201ENST00000410649 186 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC245052.5-201ENST00000416320 649 ntBASIC3.55□□□□□ -1.84
LDLRP01130 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.55□□□□□ -1.84
LDLRP01130 AC010975.2-201ENST00000427781 588 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AL365184.2-201ENST00000431139 435 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.55□□□□□ -1.84
LDLRP01130 AL139415.2-201ENST00000431968 163 ntBASIC3.55□□□□□ -1.84
LDLRP01130 MRPS18BP2-201ENST00000434310 759 ntBASIC3.55□□□□□ -1.84
LDLRP01130 HSPD1P21-201ENST00000436541 245 ntBASIC3.55□□□□□ -1.84
LDLRP01130 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.55□□□□□ -1.84
LDLRP01130 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms