Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AP002748.2-201ENST00000528671 348 ntBASIC2.28□□□□□ -2.05
POLR1AO95602 AC007375.1-201ENST00000554513 578 ntBASIC2.28□□□□□ -2.05
POLR1AO95602 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.28□□□□□ -2.05
POLR1AO95602 AC013444.2-201ENST00000603317 787 ntBASIC2.28□□□□□ -2.05
POLR1AO95602 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.28□□□□□ -2.05
POLR1AO95602 MIR4278-201ENST00000636094 69 ntBASIC2.28□□□□□ -2.05
POLR1AO95602 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.05
POLR1AO95602 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
POLR1AO95602 RNU2-37P-201ENST00000410695 177 ntBASIC2.27□□□□□ -2.05
POLR1AO95602 AC104308.1-201ENST00000454621 333 ntBASIC2.27□□□□□ -2.05
POLR1AO95602 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR1AO95602 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR1AO95602 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.27□□□□□ -2.05
POLR1AO95602 ZNF192P1-203ENST00000565888 810 ntBASIC2.27□□□□□ -2.05
POLR1AO95602 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR1AO95602 HPVC1-201ENST00000629899 1198 ntBASIC2.27□□□□□ -2.05
POLR1AO95602 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR1AO95602 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
POLR1AO95602 RNU6-1-201ENST00000383898 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-42P-201ENST00000384165 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-36P-201ENST00000384172 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-4P-201ENST00000384205 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-5P-201ENST00000384238 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-3P-201ENST00000384314 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-2-201ENST00000384627 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-9-201ENST00000384776 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-33P-201ENST00000384793 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU2-40P-201ENST00000410833 196 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 XKRYP4-201ENST00000414395 483 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.26□□□□□ -2.05
POLR1AO95602 XKRYP5-201ENST00000449659 483 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.26□□□□□ -2.05
POLR1AO95602 MTCO2P9-201ENST00000503214 694 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.26□□□□□ -2.05
POLR1AO95602 SEPT7P9-203ENST00000604116 343 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 RNU6-6P-201ENST00000606623 107 ntBASIC2.26□□□□□ -2.05
POLR1AO95602 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.25□□□□□ -2.05
POLR1AO95602 RNU1-93P-201ENST00000364704 169 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RNA5SP167-201ENST00000365461 116 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.25□□□□□ -2.05
POLR1AO95602 AL365400.1-201ENST00000431854 640 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 AC092155.2-201ENST00000454675 477 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RPL21P131-201ENST00000497298 483 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 AF131216.2-201ENST00000512316 564 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.25□□□□□ -2.05
POLR1AO95602 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.25□□□□□ -2.05
POLR1AO95602 RNY1-201ENST00000364228 113 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RNU6-342P-201ENST00000384521 104 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RNU6-1320P-201ENST00000390838 107 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RNU6-1269P-201ENST00000391139 107 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 HMGN2P19-201ENST00000425149 265 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 SNRPFP2-201ENST00000440710 251 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RNU6-599P-201ENST00000459383 107 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RNU6-1193P-201ENST00000459461 107 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.25□□□□□ -2.05
POLR1AO95602 AC006390.1-201ENST00000508068 283 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 AP004607.1-201ENST00000524456 203 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 AC234775.3-201ENST00000564612 656 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.25□□□□□ -2.05
POLR1AO95602 AL078603.1-201ENST00000603824 313 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.25□□□□□ -2.05
POLR1AO95602 RNU6-368P-201ENST00000620928 107 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 RNU6-538P-201ENST00000622329 107 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 MIR6767-201ENST00000637302 66 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 NUP58P1-201ENST00000502546 1738 ntBASIC2.25□□□□□ -2.05
POLR1AO95602 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
POLR1AO95602 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
POLR1AO95602 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
POLR1AO95602 OR4G11P-202ENST00000642116 1414 ntBASIC2.24□□□□□ -2.05
POLR1AO95602 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.24□□□□□ -2.05
POLR1AO95602 RNA5SP492-201ENST00000411330 114 ntBASIC2.24□□□□□ -2.05
POLR1AO95602 Z85995.1-201ENST00000415547 335 ntBASIC2.24□□□□□ -2.05
POLR1AO95602 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.24□□□□□ -2.05
POLR1AO95602 RN7SKP49-201ENST00000516675 260 ntBASIC2.24□□□□□ -2.05
POLR1AO95602 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.24□□□□□ -2.05
POLR1AO95602 AC084851.1-201ENST00000529105 249 ntBASIC2.24□□□□□ -2.05
POLR1AO95602 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.24□□□□□ -2.05
POLR1AO95602 MIR3199-2-201ENST00000636243 86 ntBASIC2.24□□□□□ -2.05
POLR1AO95602 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
POLR1AO95602 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
POLR1AO95602 SNRPEP2-201ENST00000397592 279 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.23□□□□□ -2.05
POLR1AO95602 RPL7P31-201ENST00000450192 724 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 HMGN1P7-201ENST00000491722 313 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 AC008526.1-201ENST00000509149 338 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 RNU6-1223P-201ENST00000517124 104 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 ANP32BP3-201ENST00000559213 706 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 AC112503.2-201ENST00000609005 552 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 OR10AB1P-201ENST00000609613 938 ntBASIC2.23□□□□□ -2.05
POLR1AO95602 RNA5SP295-201ENST00000362655 121 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.22□□□□□ -2.05
POLR1AO95602 HMGB1P45-201ENST00000435986 653 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 ARPC3P2-201ENST00000457786 533 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.22□□□□□ -2.05
POLR1AO95602 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.22□□□□□ -2.05
POLR1AO95602 RPL7P18-201ENST00000478965 734 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 AC098583.1-201ENST00000480875 255 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.22□□□□□ -2.05
POLR1AO95602 AC011604.1-201ENST00000545978 196 ntBASIC2.22□□□□□ -2.05
POLR1AO95602 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms