Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR1276-201ENST00000408707 83 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RNA5SP492-201ENST00000411330 114 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 NUP35P2-201ENST00000416748 943 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 RPL21P16-201ENST00000495531 483 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RPS29P11-201ENST00000496507 171 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 SNORD116-30-201ENST00000516468 85 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RNU6-250P-201ENST00000516958 103 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RNU6-711P-201ENST00000517255 106 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.5□□□□□ -2.17
ABCA1O95477 AC008083.2-201ENST00000546707 476 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA1O95477 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 AC008962.1-201ENST00000605729 304 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RPL23AP88-201ENST00000605759 454 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 MIR6895-201ENST00000613497 78 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 MTND4P23-201ENST00000447723 1363 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ABCA1O95477 AC007336.1-201ENST00000576365 3828 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ABCA1O95477 AL590084.1-201ENST00000407885 387 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 MIR1294-201ENST00000408503 142 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RNU2-68P-201ENST00000410878 191 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 HMGB3P2-201ENST00000411913 584 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC006548.1-201ENST00000427470 102 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 SNRPEP4-201ENST00000435815 279 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.5□□□□□ -2.17
ABCA1O95477 SYPL1P1-201ENST00000473622 768 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC010301.1-201ENST00000473936 355 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RPS29P20-201ENST00000489592 171 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA1O95477 OR10V3P-201ENST00000525712 725 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.5□□□□□ -2.17
ABCA1O95477 AL035411.2-201ENST00000604022 421 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
ABCA1O95477 AC012150.2-201ENST00000621300 544 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 CR381572.1-201ENST00000625098 102 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 AC135776.4-201ENST00000624300 1904 ntBASIC1.5□□□□□ -2.17
ABCA1O95477 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
ABCA1O95477 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.49□□□□□ -2.17
ABCA1O95477 RNU6-666P-201ENST00000363499 107 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 RFESDP1-201ENST00000422350 461 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 RPS6P14-201ENST00000425165 719 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC109583.1-201ENST00000432156 268 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 MTCYBP45-201ENST00000435243 565 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC092473.1-201ENST00000441098 221 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.49□□□□□ -2.17
ABCA1O95477 RPL30P14-201ENST00000482744 348 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC108157.1-201ENST00000510511 539 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 MIR449C-201ENST00000516047 92 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 MTCYBP41-201ENST00000528913 1123 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.49□□□□□ -2.17
ABCA1O95477 COX6CP3-201ENST00000580869 223 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC008687.2-201ENST00000597865 520 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AL590282.1-201ENST00000610379 1136 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC010678.1-201ENST00000614118 713 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC008083.4-201ENST00000615076 444 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 Z98749.2-208ENST00000381646 500 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AL138880.1-201ENST00000405824 642 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC109780.2-201ENST00000413467 845 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.49□□□□□ -2.17
ABCA1O95477 AL031663.1-201ENST00000437445 219 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 RPL23AP20-201ENST00000447965 421 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AL590664.1-201ENST00000448065 339 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC104629.2-201ENST00000468627 598 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AP000852.1-201ENST00000472460 573 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 RBM43P1-201ENST00000476891 1081 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 ARL4AP2-201ENST00000507378 601 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.49□□□□□ -2.17
ABCA1O95477 FAM92A1P1-201ENST00000528023 890 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.49□□□□□ -2.17
ABCA1O95477 AL163153.1-201ENST00000554223 283 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AP001542.2-201ENST00000593141 364 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 MTCO2P22-201ENST00000603246 681 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 AC131902.3-201ENST00000611767 581 ntBASIC1.49□□□□□ -2.17
ABCA1O95477 RNU4-31P-201ENST00000384211 141 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ABCA1O95477 RNU2-25P-201ENST00000411041 191 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 HMGN2P19-201ENST00000425149 265 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 AC023512.1-201ENST00000444513 499 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 AL021397.1-201ENST00000451806 248 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.48□□□□□ -2.17
ABCA1O95477 NF1P3-201ENST00000457709 450 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 AC111193.1-201ENST00000504097 155 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 TRMT112P2-201ENST00000512910 132 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.48□□□□□ -2.17
ABCA1O95477 NDUFA5P6-201ENST00000542110 379 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.48□□□□□ -2.17
ABCA1O95477 AC115085.1-201ENST00000588924 229 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 uc_338.9-201ENST00000617424 182 ntBASIC1.48□□□□□ -2.17
ABCA1O95477 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms