Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AL136363.2-201ENST00000604173 851 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AL136981.2-201ENST00000617319 734 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 TAB3P1-202ENST00000452645 1634 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1FO60840 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1FO60840 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1FO60840 RNU6-1339P-201ENST00000363574 91 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 MIR124-3-201ENST00000384866 87 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 MIR1303-201ENST00000408625 86 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 RNU2-52P-201ENST00000410680 190 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 TPMTP3-201ENST00000411928 735 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC004022.2-201ENST00000413824 193 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 Z99497.1-201ENST00000421282 135 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AL009174.1-201ENST00000426577 416 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.43□□□□□ -1.86
CACNA1FO60840 MED14P1-201ENST00000430517 648 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 RPS24P1-201ENST00000438550 371 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 USP9YP22-201ENST00000438971 294 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.43□□□□□ -1.86
CACNA1FO60840 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC147055.4-201ENST00000504399 745 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1FO60840 CBX3P3-201ENST00000508108 532 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 RNU6-1004P-201ENST00000516584 111 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC011260.1-201ENST00000578420 472 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 BPTFP1-201ENST00000579209 492 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.43□□□□□ -1.86
CACNA1FO60840 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.43□□□□□ -1.86
CACNA1FO60840 AL390838.2-201ENST00000602394 274 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 AC239868.4-201ENST00000608318 671 ntBASIC3.43□□□□□ -1.86
CACNA1FO60840 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CACNA1FO60840 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.42□□□□□ -1.86
CACNA1FO60840 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CACNA1FO60840 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.42□□□□□ -1.86
CACNA1FO60840 RN7SKP142-201ENST00000411236 328 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 FCF1P9-201ENST00000412546 282 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 MTND1P23-201ENST00000416931 372 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC112220.1-201ENST00000434628 355 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.42□□□□□ -1.86
CACNA1FO60840 MTCO1P19-201ENST00000443487 500 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 KATNBL1P6-201ENST00000453433 915 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 RPL21P8-201ENST00000465083 535 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 RPL23AP11-201ENST00000475260 469 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC005912.1-201ENST00000495392 255 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.42□□□□□ -1.86
CACNA1FO60840 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC048346.1-201ENST00000510247 144 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 HIGD1AP10-201ENST00000527837 282 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 ZNF861P-201ENST00000588126 639 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC090525.3-201ENST00000605601 189 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AL021997.1-201ENST00000605757 193 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC008083.4-201ENST00000615076 444 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC073968.1-201ENST00000618594 637 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CACNA1FO60840 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC016717.2-201ENST00000609089 5141 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC008725.1-201ENST00000605123 2263 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CACNA1FO60840 Y_RNA.18-201ENST00000362461 102 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 RNU6-543P-201ENST00000362576 108 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 BMS1P22-201ENST00000414726 313 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 CDK8P2-201ENST00000415020 547 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AL645939.1-201ENST00000453429 797 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 MTCYBP1-201ENST00000454315 1119 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 CFTRP1-201ENST00000456646 183 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC109927.2-201ENST00000506416 303 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC093281.2-201ENST00000510153 597 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 RNU6-416P-201ENST00000516265 103 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC023632.1-201ENST00000518463 375 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CACNA1FO60840 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CACNA1FO60840 ROCK1P1-201ENST00000573767 549 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.42□□□□□ -1.86
CACNA1FO60840 AP002360.4-201ENST00000606980 481 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AL031775.1-201ENST00000607014 887 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms