Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 HPVC1-201ENST00000629899 1198 ntBASIC1.54□□□□□ -2.16
URB1O60287 PABPC1P9-201ENST00000426076 1612 ntBASIC1.53□□□□□ -2.16
URB1O60287 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
URB1O60287 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
URB1O60287 DEFB109C-201ENST00000382575 264 ntBASIC1.53□□□□□ -2.16
URB1O60287 DEFB109B-201ENST00000382656 264 ntBASIC1.53□□□□□ -2.16
URB1O60287 MCTS2P-201ENST00000394552 546 ntBASIC1.53□□□□□ -2.16
URB1O60287 TRGV6-201ENST00000417928 299 ntBASIC1.53□□□□□ -2.16
URB1O60287 AL021397.1-201ENST00000451806 248 ntBASIC1.53□□□□□ -2.16
URB1O60287 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.53□□□□□ -2.16
URB1O60287 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.53□□□□□ -2.16
URB1O60287 MIR4419B-201ENST00000577260 68 ntBASIC1.53□□□□□ -2.16
URB1O60287 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.53□□□□□ -2.16
URB1O60287 AC008687.2-201ENST00000597865 520 ntBASIC1.53□□□□□ -2.16
URB1O60287 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
URB1O60287 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
URB1O60287 RPL30P3-201ENST00000424262 333 ntBASIC1.52□□□□□ -2.17
URB1O60287 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.52□□□□□ -2.17
URB1O60287 RPL37P6-202ENST00000464216 403 ntBASIC1.52□□□□□ -2.17
URB1O60287 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.52□□□□□ -2.17
URB1O60287 AIG1P1-201ENST00000503376 148 ntBASIC1.52□□□□□ -2.17
URB1O60287 Y_RNA.675-201ENST00000516389 149 ntBASIC1.52□□□□□ -2.17
URB1O60287 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
URB1O60287 AP001029.3-201ENST00000588063 596 ntBASIC1.52□□□□□ -2.17
URB1O60287 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
URB1O60287 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
URB1O60287 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
URB1O60287 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
URB1O60287 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
URB1O60287 RNA5SP492-201ENST00000411330 114 ntBASIC1.52□□□□□ -2.17
URB1O60287 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.52□□□□□ -2.17
URB1O60287 OR51B8P-201ENST00000449892 769 ntBASIC1.52□□□□□ -2.17
URB1O60287 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.52□□□□□ -2.17
URB1O60287 RPS26P21-201ENST00000475397 348 ntBASIC1.52□□□□□ -2.17
URB1O60287 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.52□□□□□ -2.17
URB1O60287 AC007375.1-201ENST00000554513 578 ntBASIC1.52□□□□□ -2.17
URB1O60287 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.52□□□□□ -2.17
URB1O60287 RMST_6.1-201ENST00000611980 203 ntBASIC1.52□□□□□ -2.17
URB1O60287 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.52□□□□□ -2.17
URB1O60287 MTCO1P6-201ENST00000481192 1384 ntBASIC1.52□□□□□ -2.17
URB1O60287 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
URB1O60287 ERHP2-201ENST00000402323 299 ntBASIC1.51□□□□□ -2.17
URB1O60287 RPL23AP47-201ENST00000408017 460 ntBASIC1.51□□□□□ -2.17
URB1O60287 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
URB1O60287 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.51□□□□□ -2.17
URB1O60287 MTND3P6-201ENST00000485242 339 ntBASIC1.51□□□□□ -2.17
URB1O60287 RPS29P20-201ENST00000489592 171 ntBASIC1.51□□□□□ -2.17
URB1O60287 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.51□□□□□ -2.17
URB1O60287 AC024560.3-201ENST00000608482 349 ntBASIC1.51□□□□□ -2.17
URB1O60287 AC090425.2-201ENST00000608818 501 ntBASIC1.51□□□□□ -2.17
URB1O60287 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
URB1O60287 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.51□□□□□ -2.17
URB1O60287 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
URB1O60287 AL136520.1-201ENST00000600311 1322 ntBASIC1.51□□□□□ -2.17
URB1O60287 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
URB1O60287 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
URB1O60287 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
URB1O60287 AC092447.6-201ENST00000414578 210 ntBASIC1.51□□□□□ -2.17
URB1O60287 SSXP9-201ENST00000417503 292 ntBASIC1.51□□□□□ -2.17
URB1O60287 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.51□□□□□ -2.17
URB1O60287 GTF2IP7-202ENST00000436677 309 ntBASIC1.51□□□□□ -2.17
URB1O60287 HMGB1P12-201ENST00000438594 598 ntBASIC1.51□□□□□ -2.17
URB1O60287 TPT1P14-201ENST00000448018 505 ntBASIC1.51□□□□□ -2.17
URB1O60287 AL590664.1-201ENST00000448065 339 ntBASIC1.51□□□□□ -2.17
URB1O60287 AC017099.1-201ENST00000448261 1028 ntBASIC1.51□□□□□ -2.17
URB1O60287 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.51□□□□□ -2.17
URB1O60287 RPL21P104-201ENST00000464143 478 ntBASIC1.51□□□□□ -2.17
URB1O60287 AC005730.3-201ENST00000583067 366 ntBASIC1.51□□□□□ -2.17
URB1O60287 AC126118.1-201ENST00000607744 628 ntBASIC1.51□□□□□ -2.17
URB1O60287 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
URB1O60287 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
URB1O60287 U73479.1-201ENST00000618062 168 ntBASIC1.51□□□□□ -2.17
URB1O60287 OR4G11P-202ENST00000642116 1414 ntBASIC1.5□□□□□ -2.17
URB1O60287 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
URB1O60287 RNA5SP105-201ENST00000391123 113 ntBASIC1.5□□□□□ -2.17
URB1O60287 RPL31P2-201ENST00000413849 377 ntBASIC1.5□□□□□ -2.17
URB1O60287 HMGN2P19-201ENST00000425149 265 ntBASIC1.5□□□□□ -2.17
URB1O60287 HMGN2P21-201ENST00000447764 270 ntBASIC1.5□□□□□ -2.17
URB1O60287 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.5□□□□□ -2.17
URB1O60287 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.5□□□□□ -2.17
URB1O60287 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.5□□□□□ -2.17
URB1O60287 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
URB1O60287 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
URB1O60287 AC012321.1-201ENST00000561622 1588 ntBASIC1.5□□□□□ -2.17
URB1O60287 MIR598-201ENST00000384868 97 ntBASIC1.5□□□□□ -2.17
URB1O60287 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
URB1O60287 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.5□□□□□ -2.17
URB1O60287 AL513321.1-201ENST00000441175 761 ntBASIC1.5□□□□□ -2.17
URB1O60287 HMGB1P26-201ENST00000452520 628 ntBASIC1.5□□□□□ -2.17
URB1O60287 AC069528.1-202ENST00000482888 637 ntBASIC1.5□□□□□ -2.17
URB1O60287 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.5□□□□□ -2.17
URB1O60287 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.5□□□□□ -2.17
URB1O60287 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.5□□□□□ -2.17
URB1O60287 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.5□□□□□ -2.17
URB1O60287 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
URB1O60287 AC110792.3-201ENST00000595906 1614 ntBASIC1.5□□□□□ -2.17
URB1O60287 AC009487.4-201ENST00000624969 3585 ntBASIC1.49□□□□□ -2.17
URB1O60287 PAICSP7-201ENST00000419829 962 ntBASIC1.49□□□□□ -2.17
URB1O60287 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.49□□□□□ -2.17
URB1O60287 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms