Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGB3O15347 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGB3O15347 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
HMGB3O15347 MIR27B-201ENST00000385129 97 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AL139039.1-201ENST00000401900 692 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 RNU6-77P-201ENST00000410554 91 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGB3O15347 AC099548.1-201ENST00000421443 426 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGB3O15347 USP12PX-201ENST00000432383 1057 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC024082.2-201ENST00000434771 238 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 TAAR7P-201ENST00000436141 242 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.82□□□□□ -2.12
HMGB3O15347 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGB3O15347 MTCO3P2-201ENST00000457365 171 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC022493.1-201ENST00000492984 337 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC147055.4-201ENST00000504399 745 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 RNA5SP320-201ENST00000516263 124 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC015688.2-201ENST00000584523 262 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGB3O15347 BNIP3P4-201ENST00000604946 565 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGB3O15347 AC107214.2-201ENST00000608204 634 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC084757.4-201ENST00000616350 526 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 AC073308.1-201ENST00000623696 305 ntBASIC1.82□□□□□ -2.12
HMGB3O15347 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
HMGB3O15347 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HMGB3O15347 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
HMGB3O15347 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMGB3O15347 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HMGB3O15347 AL109809.4-201ENST00000603520 2185 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 RNU6-859P-201ENST00000362728 107 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AL360182.1-201ENST00000397433 468 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 NPM1P10-201ENST00000398310 865 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AL121978.1-201ENST00000402778 359 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 RN7SKP27-201ENST00000410684 333 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 MTND1P23-201ENST00000416931 372 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 ARL5AP4-201ENST00000430731 512 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 UBE2FP3-201ENST00000436366 524 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 GPM6BP3-201ENST00000442797 145 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AC009237.8-201ENST00000445492 379 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGB3O15347 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMGB3O15347 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 AC026436.1-201ENST00000510537 270 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AC034159.1-201ENST00000513885 583 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMGB3O15347 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.81□□□□□ -2.12
HMGB3O15347 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGB3O15347 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 ANP32BP3-201ENST00000559213 706 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 AC135628.1-201ENST00000568867 534 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AC090132.2-201ENST00000615881 347 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HMGB3O15347 AL162373.1-201ENST00000620433 407 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGB3O15347 OR5H6-203ENST00000642105 978 ntBASIC1.81□□□□□ -2.12
HMGB3O15347 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HMGB3O15347 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HMGB3O15347 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGB3O15347 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMGB3O15347 SNORA16B-201ENST00000364674 135 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 SNORA44-201ENST00000384584 132 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 SNORA46.1-201ENST00000391069 153 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 AL445529.1-201ENST00000398713 389 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 AL024474.1-201ENST00000404655 591 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 RNU2-52P-201ENST00000410680 190 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 SRIP2-201ENST00000428470 166 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGB3O15347 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGB3O15347 AP000936.2-201ENST00000447151 681 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 AL592447.1-201ENST00000447592 540 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 RSL24D1P3-201ENST00000449255 495 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 SNORD109B-201ENST00000458961 67 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 SNORD109A-201ENST00000459128 67 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 RPL36AP51-201ENST00000487216 318 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGB3O15347 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HMGB3O15347 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGB3O15347 COL6A4P2-205ENST00000509855 506 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 SCARNA11.3-201ENST00000517276 130 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 COX6CP8-201ENST00000522620 226 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HMGB3O15347 CYCSP26-201ENST00000534107 320 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGB3O15347 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.8□□□□□ -2.12
HMGB3O15347 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGB3O15347 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGB3O15347 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.8□□□□□ -2.12
HMGB3O15347 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.8□□□□□ -2.12
HMGB3O15347 AL138976.2-201ENST00000563989 694 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms