Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC013412.1-201ENST00000610687 192 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 AC245884.12-201ENST00000615364 59 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.5□□□□□ -2.17
HMGN4O00479 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGN4O00479 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HMGN4O00479 ZNF876P-202ENST00000398732 1485 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 AC103710.2-202ENST00000641454 2853 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HMGN4O00479 MIR524-201ENST00000385242 87 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 RNU6-244P-201ENST00000391028 104 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 MTND4LP20-201ENST00000402379 270 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 RNU4-72P-201ENST00000410754 173 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 POLHP1-201ENST00000411806 470 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.49□□□□□ -2.17
HMGN4O00479 IFNA11P-201ENST00000446352 526 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 BZW1P2-201ENST00000473537 826 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.49□□□□□ -2.17
HMGN4O00479 MTCO3P44-201ENST00000510977 541 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.49□□□□□ -2.17
HMGN4O00479 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.49□□□□□ -2.17
HMGN4O00479 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.49□□□□□ -2.17
HMGN4O00479 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HMGN4O00479 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HMGN4O00479 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGN4O00479 AC009127.3-201ENST00000570531 403 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGN4O00479 MIR4658-201ENST00000584344 65 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.49□□□□□ -2.17
HMGN4O00479 RPS15AP11-201ENST00000594193 385 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 AP004247.3-201ENST00000608682 624 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 AC098679.5-201ENST00000624394 571 ntBASIC1.49□□□□□ -2.17
HMGN4O00479 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HMGN4O00479 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HMGN4O00479 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.48□□□□□ -2.17
HMGN4O00479 SNORA1.3-201ENST00000384676 136 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 RPS4XP3-201ENST00000398541 413 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 MTCO3P4-201ENST00000419236 787 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGN4O00479 HMGN2P3-201ENST00000433603 273 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 HMGN2P5-201ENST00000436882 273 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 SSXP1-201ENST00000453640 473 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 snoU13.3-201ENST00000459441 104 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HMGN4O00479 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGN4O00479 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGN4O00479 AC016065.2-201ENST00000514530 444 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 RNU6-295P-201ENST00000516901 104 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 snoZ278.1-201ENST00000517059 112 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGN4O00479 AP005435.4-201ENST00000529514 284 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 AC107954.1-201ENST00000565906 727 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGN4O00479 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGN4O00479 AC095031.1-201ENST00000623685 672 ntBASIC1.48□□□□□ -2.17
HMGN4O00479 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HMGN4O00479 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGN4O00479 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGN4O00479 MTND4P23-201ENST00000447723 1363 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
HMGN4O00479 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGN4O00479 RNA5SP27-201ENST00000363839 119 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 RNU6-234P-201ENST00000365229 104 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 MIR504-201ENST00000385065 83 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 U3.40-201ENST00000408706 208 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AC009237.2-201ENST00000421358 284 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGN4O00479 BX510359.4-201ENST00000423750 193 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 MTCYBP34-201ENST00000439552 670 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AL513321.1-201ENST00000441175 761 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 IPO7P1-201ENST00000442031 636 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGN4O00479 RPL23AP23-201ENST00000452590 471 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 USP9YP10-201ENST00000454868 628 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AC008427.1-201ENST00000503102 655 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGN4O00479 OR10V3P-201ENST00000525712 725 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 NDUFS5P6-201ENST00000529136 295 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGN4O00479 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGN4O00479 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGN4O00479 AC090897.2-201ENST00000581715 130 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AC011494.1-201ENST00000596454 237 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMGN4O00479 AC091834.1-201ENST00000614543 472 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGN4O00479 AP003072.5-201ENST00000623872 773 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AC026634.1-201ENST00000634369 198 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AC116618.1-201ENST00000634617 774 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGN4O00479 AC006026.1-201ENST00000444025 1803 ntBASIC1.47□□□□□ -2.17
HMGN4O00479 AL359851.1-201ENST00000569460 4997 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 Y_RNA.62-201ENST00000362840 99 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 SNORA6-201ENST00000384033 151 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 RNU2-17P-201ENST00000410290 190 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 RPL7P30-201ENST00000420888 709 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 HMGB3P12-201ENST00000438745 556 ntBASIC1.46□□□□□ -2.18
HMGN4O00479 OR10R1P-201ENST00000441524 1141 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms