Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXN3O00409 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN3O00409 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXN3O00409 RPL23AP31-201ENST00000456160 467 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 AC027673.1-201ENST00000456245 405 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 FTH1P2-201ENST00000466086 412 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 RPL7P47-201ENST00000497299 556 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXN3O00409 AC022483.1-201ENST00000514020 567 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 RN7SKP244-201ENST00000516513 307 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 RNU6-64P-201ENST00000517119 105 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 AL360157.1-201ENST00000565962 87 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN3O00409 AL391840.1-201ENST00000571144 367 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN3O00409 NRBF2P1-201ENST00000587407 859 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 AC024941.1-201ENST00000612250 334 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 AL603758.1-201ENST00000618654 241 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 SEPT14P19-203ENST00000633205 211 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXN3O00409 OR5AK4P-201ENST00000635912 903 ntBASIC4.18□□□□□ -1.74
FOXN3O00409 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXN3O00409 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXN3O00409 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
FOXN3O00409 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXN3O00409 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXN3O00409 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN3O00409 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
FOXN3O00409 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
FOXN3O00409 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN3O00409 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXN3O00409 RNY1P12-201ENST00000364251 105 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 SNORA62-201ENST00000365493 153 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN3O00409 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN3O00409 RNU2-62P-201ENST00000410868 191 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AL159169.1-201ENST00000421119 127 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN3O00409 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN3O00409 AC090774.1-201ENST00000435925 246 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN3O00409 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN3O00409 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN3O00409 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN3O00409 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN3O00409 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXN3O00409 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN3O00409 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN3O00409 AC010342.1-201ENST00000514047 877 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 IGKV2-23-201ENST00000518729 323 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.17□□□□□ -1.74
FOXN3O00409 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
FOXN3O00409 AC123904.3-201ENST00000547218 814 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AC090877.1-201ENST00000561418 344 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 BNIP3P33-201ENST00000598912 569 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AC245014.2-201ENST00000603689 287 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AC246785.4-201ENST00000605374 287 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 TUG1_2.1-201ENST00000614234 87 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 MIR6130-201ENST00000619419 109 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 AC103858.2-201ENST00000621471 543 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXN3O00409 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN3O00409 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN3O00409 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXN3O00409 MTND5P26-201ENST00000426018 1752 ntBASIC4.17□□□□□ -1.74
FOXN3O00409 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN3O00409 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXN3O00409 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
FOXN3O00409 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
FOXN3O00409 OR5J1P-201ENST00000313544 939 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
FOXN3O00409 SNORA51.2-201ENST00000364595 132 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 SNORA23-201ENST00000365128 182 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 PTMAP5-201ENST00000393073 333 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AL109755.1-201ENST00000401791 649 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 RPL21P24-201ENST00000413752 448 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXN3O00409 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN3O00409 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXN3O00409 AL596276.1-201ENST00000434465 418 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 OR4C10P-201ENST00000434991 931 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AL451074.3-201ENST00000437709 472 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 MTATP6P23-201ENST00000440153 476 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AL500522.2-201ENST00000448562 343 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AL162389.1-201ENST00000449233 177 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AC079448.1-201ENST00000449377 373 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AL049714.1-201ENST00000466686 347 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 PPIAP15-201ENST00000479662 484 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AC108860.1-201ENST00000484521 383 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXN3O00409 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN3O00409 RNU6-1220P-201ENST00000517126 108 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 NRON-201ENST00000517270 370 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 MTCO2P4-201ENST00000517968 247 ntBASIC4.16□□□□□ -1.74
FOXN3O00409 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN3O00409 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN3O00409 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXN3O00409 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXN3O00409 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms