Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 MIR4436B1-201ENST00000583272 91 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 MIR4715-201ENST00000584117 79 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 BNIP3P40-201ENST00000596017 556 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AC006077.1-201ENST00000604746 343 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 SNHG22-203ENST00000617833 660 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RNU6-931P-201ENST00000363850 107 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RNU6-461P-201ENST00000364195 107 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RNU6-512P-201ENST00000364438 103 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RNU6-278P-201ENST00000390945 109 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RPS16P5-201ENST00000406501 404 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RPL7P10-201ENST00000417407 739 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AL035407.1-201ENST00000429211 571 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 MTND1P20-201ENST00000430341 950 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 MTND1P28-201ENST00000435623 950 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 Z80107.1-201ENST00000436830 412 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC005094.1-201ENST00000440420 368 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC023598.1-201ENST00000472521 361 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 RN7SKP157-201ENST00000516174 282 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 MIR3117-201ENST00000584034 78 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC245884.10-201ENST00000597355 337 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 IPO5P1-202ENST00000600039 287 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 AC105148.1-201ENST00000604961 409 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 MIR7155-201ENST00000615925 56 ntBASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB1P1B2RPK0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 SNORD56.3-201ENST00000363507 71 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 RNA5SP509-201ENST00000364577 119 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 RNU6-253P-201ENST00000384730 105 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC007066.1-201ENST00000392902 381 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL139397.2-201ENST00000404529 772 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL359634.1-202ENST00000404721 284 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 SNORA11B-201ENST00000408175 129 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC013410.2-201ENST00000422627 201 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL022400.1-201ENST00000423946 935 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 ELOCP14-201ENST00000428070 331 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 ISCA1P2-201ENST00000438679 421 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 ELOCP7-201ENST00000439968 331 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 snoU13.22-201ENST00000459428 104 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 RPS27AP10-201ENST00000496103 208 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC104619.4-201ENST00000510773 249 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 RNU5A-4P-201ENST00000516588 111 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 H3F3AP1-201ENST00000559984 334 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC098826.3-201ENST00000603823 466 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC011458.1-201ENST00000604034 617 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AC103710.1-201ENST00000610003 901 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL355472.4-201ENST00000610233 626 ntBASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HMGB1P1B2RPK0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGB1P1B2RPK0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGB1P1B2RPK0 AC004972.1-201ENST00000623934 2209 ntBASIC3.61□□□□□ -1.83
HMGB1P1B2RPK0 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms