Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RN7SL432P-201ENST00000484057 298 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 RPL38P4-201ENST00000502376 214 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 HIF1AP1-201ENST00000553642 175 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AL138976.2-201ENST00000563989 694 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC009852.2-201ENST00000567898 485 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC024619.4-201ENST00000580924 316 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC091135.1-201ENST00000585943 307 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 BNIP3P10-201ENST00000605360 577 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 U3.45-201ENST00000607547 219 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC130324.3-201ENST00000614165 542 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AL354950.2-201ENST00000617939 290 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AC139769.1-204ENST00000472297 1931 ntBASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC85CA6NKD9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC083843.3-201ENST00000623679 2186 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC004925.1-201ENST00000624256 2706 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AL356776.1-201ENST00000406574 447 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 RNU6-373P-201ENST00000411247 98 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 RPL21P111-201ENST00000418453 477 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 MTCO1P39-201ENST00000426148 480 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 RPS26P28-201ENST00000470806 348 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 RPL39P36-201ENST00000490784 156 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 RNA5SP519-201ENST00000516480 119 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC136777.2-201ENST00000522979 358 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AP005435.4-201ENST00000529514 284 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC093012.1-202ENST00000549403 582 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC015917.1-201ENST00000579654 510 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AL022099.1-201ENST00000604551 712 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC011755.1-201ENST00000623763 2049 ntBASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC85CA6NKD9 AC103710.2-202ENST00000641454 2853 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 Y_RNA.157-201ENST00000363638 102 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 Y_RNA.279-201ENST00000364763 95 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RNU6-641P-201ENST00000384006 107 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 AL591416.1-201ENST00000404015 867 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RNA5SP36-201ENST00000410197 133 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RN7SKP156-201ENST00000410308 342 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RNU4-6P-201ENST00000410804 122 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RPL36AP53-201ENST00000432891 316 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RPS11P1-201ENST00000451072 473 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RN7SKP219-201ENST00000516825 296 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 SNORA31.20-201ENST00000517111 133 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 OR5B19P-201ENST00000531766 928 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 BNIP3P9-201ENST00000603714 553 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 AL137843.1-201ENST00000605078 385 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 AC110801.1-201ENST00000623590 212 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 AC009033.1-201ENST00000624279 431 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 RIOK3P1-201ENST00000418778 1528 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms