Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AP000949.1-201ENST00000438328 629 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 HMGB1P18-201ENST00000438801 619 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AL500527.1-201ENST00000448532 255 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 HSPE1P24-201ENST00000450782 238 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC015908.1-201ENST00000478739 476 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 RPS29P11-201ENST00000496507 171 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC092436.1-201ENST00000506450 503 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 OR10V3P-201ENST00000525712 725 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 RANP3-201ENST00000530970 276 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC068339.2-201ENST00000534395 618 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC008269.2-201ENST00000561915 1105 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 MIR4285-201ENST00000581001 85 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 MIR3616-201ENST00000584070 92 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC007229.1-201ENST00000590455 412 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC084768.2-201ENST00000622736 221 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC110994.2-201ENST00000635481 492 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AL356473.1-201ENST00000406203 1408 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 CCT4P2-201ENST00000233836 1548 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC080128.1-201ENST00000474389 1917 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 U8.1-201ENST00000362843 134 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 RNU6-618P-201ENST00000363518 112 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 RNA5SP27-201ENST00000363839 119 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 MIR583-201ENST00000384846 75 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 MIR758-201ENST00000390227 88 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 RPS4XP3-201ENST00000398541 413 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AL356320.2-201ENST00000417263 507 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AMD1P1-201ENST00000457220 922 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 MTCO1P42-201ENST00000457379 726 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 EIF4EP5-201ENST00000528228 640 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC139103.1-201ENST00000534696 1030 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC110588.1-201ENST00000559699 137 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AL160281.1-201ENST00000605307 311 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC087241.4-201ENST00000612441 480 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AP001002.2-201ENST00000625137 386 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LINC01549A6NIU2 AC091812.1-201ENST00000432235 1948 ntBASIC1.05□□□□□ -2.24
LINC01549A6NIU2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC006026.1-201ENST00000444025 1803 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AL033519.2-201ENST00000403958 392 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AL512604.1-201ENST00000404812 257 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC005410.1-202ENST00000460347 485 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC069528.1-202ENST00000482888 637 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC104564.1-201ENST00000493028 407 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 MTCYBP17-201ENST00000503579 789 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 RNU6-250P-201ENST00000516958 103 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 SNORA31.18-201ENST00000517043 134 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 RNU2-19P-201ENST00000517288 84 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC005034.5-201ENST00000604219 466 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC010678.1-201ENST00000614118 713 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC011330.2-201ENST00000621680 635 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC109454.4-201ENST00000623411 649 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC119674.1-212ENST00000641155 993 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 AC104454.1-201ENST00000421341 1401 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
LINC01549A6NIU2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.04□□□□□ -2.24
LINC01549A6NIU2 SNORA23-201ENST00000365128 182 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 SNORA1.3-201ENST00000384676 136 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 MIR491-201ENST00000384877 84 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 RNA5SP171-201ENST00000391071 115 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 SNRPEP2-201ENST00000397592 279 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 RN7SKP223-201ENST00000410582 62 ntBASIC1.03□□□□□ -2.24
LINC01549A6NIU2 RPS3AP44-201ENST00000425466 790 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms