Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC133473.1-201ENST00000455173 299 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 FCF1P3-201ENST00000496394 590 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC021146.1-201ENST00000511202 716 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 MTCO1P35-201ENST00000515270 228 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-798P-201ENST00000516912 103 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-445P-201ENST00000516949 107 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AP006245.1-201ENST00000522549 120 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC022616.3-201ENST00000523940 148 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AL133271.1-201ENST00000538229 291 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC005255.1-201ENST00000593748 216 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 MIR98-201ENST00000606724 119 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC090517.2-201ENST00000614966 680 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AL359880.1-201ENST00000621879 266 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 MIR6863-201ENST00000636112 90 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TCRBV7S3A2A0A539 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TCRBV7S3A2A0A539 RPS4XP5-202ENST00000449995 1334 ntBASIC3.71□□□□□ -1.81
TCRBV7S3A2A0A539 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-223P-201ENST00000362830 107 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-169P-201ENST00000365336 107 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-282P-201ENST00000365357 103 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 RNY3P13-201ENST00000365542 102 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 SNORA20.2-201ENST00000383922 131 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 MTHFD2P2-201ENST00000407725 247 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 MIR548F1-201ENST00000408667 84 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AL591419.1-201ENST00000427423 339 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AL451074.3-201ENST00000437709 472 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 HSFY6P-201ENST00000445573 403 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 HMGN2P21-201ENST00000447764 270 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 FGF7P6-202ENST00000451282 293 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 MRPS31P2-201ENST00000451581 518 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AC135721.1-201ENST00000497954 479 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-314P-201ENST00000516574 104 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AP001893.2-201ENST00000526949 202 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 DEFB108D-201ENST00000527787 222 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 FAM92A1P1-201ENST00000528023 890 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 XIAPP1-201ENST00000603162 600 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AC103710.2-201ENST00000609912 942 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AL590282.1-201ENST00000610379 1136 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AL353748.2-201ENST00000622148 471 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AL354798.1-201ENST00000622505 329 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 AL732372.2-225ENST00000642124 456 ntBASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
TCRBV7S3A2A0A539 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 OR1S2-201ENST00000302592 978 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 RNA5SP502-201ENST00000362694 119 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-335P-201ENST00000364563 113 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-629P-201ENST00000384061 103 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 Y_RNA.554-201ENST00000384672 102 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-278P-201ENST00000390945 109 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AL136116.1-201ENST00000403591 381 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 RNU4-55P-201ENST00000410731 137 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 RPS15AP12-201ENST00000419498 388 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AC073464.1-201ENST00000429823 534 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AC234775.1-201ENST00000454247 670 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 VN1R105P-201ENST00000486595 910 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 HMGN1P28-201ENST00000521340 364 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 RBM11P1-201ENST00000604951 799 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AC092954.2-201ENST00000609103 430 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 AC017083.3-201ENST00000609955 700 ntBASIC3.7□□□□□ -1.82
TCRBV7S3A2A0A539 ZYXP1-201ENST00000617638 118 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms