Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GPC6Q9Y625 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.29□□□□□ -1.56
GPC6Q9Y625 AC006206.1-201ENST00000544842 3387 ntBASIC5.29□□□□□ -1.56
GPC6Q9Y625 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC6Q9Y625 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC6Q9Y625 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC6Q9Y625 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 RNU1-150P-201ENST00000362491 162 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 RNA5SP326-201ENST00000363209 110 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 Y_RNA.237-201ENST00000364439 102 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 Y_RNA.274-201ENST00000364714 101 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 Y_RNA.539-201ENST00000384635 107 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 RNU6-700P-201ENST00000391043 107 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AP000275.1-201ENST00000411943 390 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 MRPL53P1-201ENST00000414323 319 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC6Q9Y625 TMEM183AP1-205ENST00000432739 290 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AL159987.2-201ENST00000432754 307 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC090774.1-201ENST00000435925 246 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC104332.1-201ENST00000440471 797 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 RPEP5-201ENST00000441137 268 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 LINC02210-201ENST00000444561 288 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 HMGN1P2-201ENST00000445197 310 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GPC6Q9Y625 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC011411.1-201ENST00000509592 876 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 GMPSP1-201ENST00000514075 579 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC034114.1-201ENST00000520293 285 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC087369.1-201ENST00000520775 996 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 IGLV3-30-201ENST00000524362 298 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC126177.3-201ENST00000551839 688 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 CPDP1-201ENST00000579660 283 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 AC123912.5-201ENST00000605470 343 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GPC6Q9Y625 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 OR4F13P-202ENST00000560066 2054 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 SAGE4P-201ENST00000442271 3381 ntBASIC5.28□□□□□ -1.56
GPC6Q9Y625 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
GPC6Q9Y625 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC005183.1-201ENST00000603687 1979 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 ADAM5-202ENST00000399789 1942 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 Y_RNA.84-201ENST00000363011 104 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 RNU4-44P-201ENST00000363050 141 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 Y_RNA.324-201ENST00000365165 102 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 RPS3AP2-201ENST00000407190 754 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 U3.42-201ENST00000408746 214 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 HMGN1P20-201ENST00000411849 300 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 EI24P1-201ENST00000416584 867 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 PPP1R11P2-201ENST00000423543 382 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC096920.1-201ENST00000423991 241 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 GAPDHP58-201ENST00000438477 1006 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 RANP8-201ENST00000444720 713 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC090804.1-201ENST00000448870 490 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 ABCC13-202ENST00000463099 3842 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 RPS17P15-201ENST00000475609 349 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC109329.1-201ENST00000518744 317 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 FKBP1BP1-201ENST00000553366 325 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC027228.2-201ENST00000567141 2154 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 SNORD91B-202ENST00000608459 222 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC004792.1-201ENST00000614523 137 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GPC6Q9Y625 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.27□□□□□ -1.57
GPC6Q9Y625 AC007938.2-201ENST00000604666 2634 ntBASIC5.27□□□□□ -1.57
GPC6Q9Y625 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms