Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 Y_RNA.3-201ENST00000362331 103 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 RNA5SP235-201ENST00000365411 114 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 Y_RNA.517-201ENST00000384551 106 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 U8.14-201ENST00000390843 143 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 RNU6-837P-201ENST00000391056 108 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AL356473.1-201ENST00000406203 1408 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 MIR320C1-201ENST00000408566 88 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 Y_RNA.619-201ENST00000410951 90 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AL022238.1-201ENST00000442557 355 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC002381.1-201ENST00000447049 280 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 SNORD42A-201ENST00000459584 64 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 PLGLA-201ENST00000465668 449 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC034159.1-201ENST00000513885 583 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 RN7SKP116-201ENST00000516902 319 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC022861.1-201ENST00000522981 663 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC074050.1-201ENST00000563247 211 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 EIF1P4-201ENST00000572664 335 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC073648.5-201ENST00000603502 305 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 RPL23AP92-201ENST00000603609 255 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC069200.1-201ENST00000609511 323 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC015540.1-201ENST00000615828 501 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC004009.2-201ENST00000623016 728 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC093591.3-201ENST00000634516 308 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 CRYM-AS1-204ENST00000637983 556 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 ZNF734P-201ENST00000419494 1534 ntBASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 AL021368.2-201ENST00000606125 5352 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 SNORD17-201ENST00000390930 237 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL031679.1-201ENST00000400616 525 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RNU2-66P-201ENST00000410650 161 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RNU6-248P-201ENST00000410720 107 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AF274854.1-201ENST00000413236 615 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RPL21P32-201ENST00000419877 477 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 OFD1P18Y-201ENST00000420889 959 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC012065.2-201ENST00000421295 375 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RPS3AP44-201ENST00000425466 790 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC007742.1-201ENST00000425789 329 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL356583.2-201ENST00000426536 280 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL035410.1-201ENST00000427409 427 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL159987.2-201ENST00000432754 307 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 ELOCP26-201ENST00000436067 329 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 PRDX3P3-201ENST00000447765 522 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 PRSS3P4-201ENST00000453323 162 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 OR6K1P-201ENST00000456766 971 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC017015.1-201ENST00000477387 286 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC106872.3-201ENST00000495104 446 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC024589.1-201ENST00000512207 263 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC116347.2-201ENST00000514912 523 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AP004371.1-201ENST00000525240 214 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL390208.1-201ENST00000605885 644 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 RMST_8.1-201ENST00000610287 165 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC087241.4-201ENST00000612441 480 ntBASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX9Q9Y5X1 AL645937.1-201ENST00000641739 1652 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms