Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 MIR4293-201ENST00000584305 78 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 XIAPP1-201ENST00000603162 600 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 AC007621.1-201ENST00000604544 437 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 AL355073.2-201ENST00000612106 557 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 MIR7151-201ENST00000617477 60 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 AC243312.2-201ENST00000623340 601 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 AL136313.1-201ENST00000624804 202 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 Z82217.1-201ENST00000625157 8149 ntBASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHA3Q9Y5H8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AL365440.1-201ENST00000436135 2167 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 Y_RNA.89-201ENST00000363031 102 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 SNORD35B-201ENST00000363660 87 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-534P-201ENST00000364877 106 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 RNA5SP366-201ENST00000365454 123 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 MIR558-201ENST00000384920 94 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 FGF7P8-201ENST00000402994 292 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 RNU2-43P-201ENST00000410306 190 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AMD1P2-201ENST00000412936 992 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 RPS6P12-201ENST00000432491 726 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 RPS20P5-201ENST00000434808 360 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 NFU1P2-201ENST00000448700 469 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC083798.1-201ENST00000472671 131 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 S100A11P1-201ENST00000477525 312 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC069499.1-201ENST00000489433 509 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 OR4R1P-201ENST00000529879 463 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC009643.1-201ENST00000532030 391 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 MIR5684-201ENST00000585074 65 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC067959.1-201ENST00000604334 379 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 Z84480.1-201ENST00000605131 311 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AL034351.1-201ENST00000605288 668 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC008536.2-201ENST00000607284 349 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC004067.1-201ENST00000608733 700 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC093788.1-201ENST00000609356 927 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 MIR378J-201ENST00000611988 109 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 AL008636.1-201ENST00000625038 1018 ntBASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHA3Q9Y5H8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 U3.15-201ENST00000365398 212 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-39P-201ENST00000384344 107 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 SNORD3H-201ENST00000384486 214 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 MRPL50P2-201ENST00000416821 482 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 OR2AS1P-201ENST00000427827 319 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 MED13P1-201ENST00000428342 171 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 KCTD9P3-201ENST00000434597 1169 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 RPL7P54-201ENST00000438336 674 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 RPS15AP9-201ENST00000439856 381 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 VN1R34P-201ENST00000447387 883 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AL162389.1-201ENST00000449233 177 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 FDX1P2-201ENST00000450769 375 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC011276.1-201ENST00000469688 323 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 RN7SL303P-201ENST00000469773 251 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 RN7SL860P-201ENST00000473738 223 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 HSPD1P15-201ENST00000505573 1122 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 AC026801.2-201ENST00000515352 425 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-1281P-201ENST00000516223 105 ntBASIC4.23□□□□□ -1.73
PCDHA3Q9Y5H8 RNU7-51P-201ENST00000516560 62 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms