Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 AL590099.1-201ENST00000615276 138 ntBASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 AP003122.6-201ENST00000623831 495 ntBASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 AC011477.1-204ENST00000623416 1325 ntBASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA1Q9Y5H4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC233263.6-201ENST00000631132 1963 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC087359.1-201ENST00000508335 1740 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 RNU6-462P-201ENST00000362659 105 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 TPMTP3-201ENST00000411928 735 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 MRPL50P2-201ENST00000416821 482 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 COTL1P1-201ENST00000422309 375 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AL353678.1-201ENST00000422735 741 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 YWHAZP7-201ENST00000436906 631 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC092798.1-201ENST00000458542 409 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC004801.2-202ENST00000463559 283 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AL049714.1-201ENST00000466686 347 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC118282.1-201ENST00000506408 765 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 RN7SKP83-201ENST00000516512 178 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 RNU6-528P-201ENST00000516926 100 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC239860.2-201ENST00000525886 270 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 UBTFL10-201ENST00000528532 562 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AP003461.1-201ENST00000528866 78 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC079089.3-201ENST00000603094 673 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 RNU6-88P-201ENST00000606801 100 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC140725.3-201ENST00000616193 880 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 AC007490.1-201ENST00000624321 703 ntBASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA1Q9Y5H4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 RNU6-97P-201ENST00000363387 104 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 SSXP9-201ENST00000417503 292 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AL035407.1-201ENST00000429211 571 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 THAP5P1-201ENST00000439089 262 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AL606662.1-201ENST00000445763 553 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 Z75741.1-201ENST00000446793 314 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 MTND1P31-201ENST00000449206 961 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 PAXBP1P1-201ENST00000449315 447 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AL109741.2-201ENST00000455561 343 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 AC111000.2-201ENST00000507775 550 ntBASIC3.3□□□□□ -1.88
PCDHGA1Q9Y5H4 HSPE1P23-201ENST00000509838 286 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms