Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MIR130B-202ENST00000385018 82 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AC023141.3-201ENST00000436698 278 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 UQCRBP2-201ENST00000447827 297 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AL356981.1-201ENST00000454879 684 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 TOMM22P6-201ENST00000465035 409 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 RPS15AP34-201ENST00000487776 387 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AL160314.1-201ENST00000490836 438 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 PDCD5P2-201ENST00000507570 312 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 SNORA70.11-201ENST00000515987 138 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 SNORA70.13-201ENST00000516116 138 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 Y_RNA.710-201ENST00000516975 110 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 IGKV2D-36-201ENST00000518643 226 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 TRAV37-201ENST00000553906 342 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AC103996.1-201ENST00000555468 102 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AC007448.1-201ENST00000582714 234 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AC067852.4-201ENST00000590314 478 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 AC068768.2-201ENST00000602352 343 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 PRO1804-201ENST00000623780 2050 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC138907.8-201ENST00000623981 2256 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AL137141.1-201ENST00000624622 4836 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-989P-201ENST00000362756 107 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-818P-201ENST00000364837 108 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 ENSAP1-201ENST00000392855 326 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 CYB5AP4-201ENST00000396692 399 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 EEF1A1P1-201ENST00000447052 739 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 NUTF2P7-201ENST00000453086 375 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 HLA-DPA3-207ENST00000454398 229 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 RN7SL174P-201ENST00000475578 289 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 RNU7-110P-201ENST00000516891 62 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC020916.2-201ENST00000591242 360 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 MIR132-201ENST00000591554 101 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC127024.6-201ENST00000621598 424 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AC140134.1-201ENST00000511830 3544 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 PABPC1P6-201ENST00000445594 1829 ntBASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB3Q9Y5E6 AL359955.1-201ENST00000455242 3275 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 SNORA51.1-201ENST00000363243 140 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-1255P-201ENST00000363434 112 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 DUTP5-201ENST00000406790 469 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AL357139.1-201ENST00000407792 426 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 RNU5A-5P-201ENST00000411054 116 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 RPL35AP31-201ENST00000418340 337 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AL117339.3-201ENST00000418733 162 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 PPP1R11P2-201ENST00000423543 382 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AC090774.1-201ENST00000435925 246 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 FHP1-201ENST00000442741 703 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 RPS29P27-201ENST00000463711 170 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms