Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RPL21P41-201ENST00000459863 264 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AC012158.1-204ENST00000483430 465 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 RPS27AP13-201ENST00000498403 237 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 RNY3P15-201ENST00000516297 97 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 SCARNA20.4-201ENST00000516969 131 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 SUB1P3-201ENST00000564581 315 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AC109446.1-201ENST00000566172 220 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 AL109918.3-201ENST00000603072 338 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AL021879.1-201ENST00000611756 288 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 SDR42E1P2-201ENST00000614861 481 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AL591926.8-201ENST00000616876 211 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NOD1Q9Y239 AC112198.2-201ENST00000426589 6996 ntBASIC5.72□□□□□ -1.49
NOD1Q9Y239 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NOD1Q9Y239 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NOD1Q9Y239 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.71□□□□□ -1.49
NOD1Q9Y239 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.71□□□□□ -1.49
NOD1Q9Y239 AL672167.1-205ENST00000641112 3080 ntBASIC5.71□□□□□ -1.49
NOD1Q9Y239 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
NOD1Q9Y239 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NOD1Q9Y239 Y_RNA.314-201ENST00000365114 102 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 RNA5SP428-201ENST00000365129 132 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 RNU2-43P-201ENST00000410306 190 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 AL590139.1-201ENST00000416267 400 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NOD1Q9Y239 RPL7L1P1-201ENST00000448259 785 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 AC114801.2-201ENST00000503825 781 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 AC091912.1-201ENST00000511351 248 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 RN7SKP258-201ENST00000517151 304 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 AC069113.1-201ENST00000517763 267 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.71□□□□□ -1.5
NOD1Q9Y239 AC138907.8-201ENST00000623981 2256 ntBASIC5.71□□□□□ -1.5
NOD1Q9Y239 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 RNU6-874P-201ENST00000362390 105 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 Y_RNA.210-201ENST00000364161 110 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 RNU6-371P-201ENST00000364283 108 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 RN7SKP153-201ENST00000365026 316 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 RNU6-1329P-201ENST00000365664 107 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 Y_RNA.396-201ENST00000383949 103 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC097374.1-203ENST00000400783 485 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 HSPE1P8-201ENST00000406997 288 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 RPL21P90-201ENST00000415692 466 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 OSTCP8-201ENST00000445117 448 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 RPS23P3-201ENST00000470993 430 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 RN7SL481P-201ENST00000477764 299 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 OR7H2P-201ENST00000513483 306 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC006427.1-201ENST00000514359 712 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 RNU6-840P-201ENST00000517275 65 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC104576.1-201ENST00000524225 88 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC067852.4-201ENST00000590314 478 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 MIR15A-201ENST00000607334 83 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 AL139124.1-201ENST00000609123 421 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 MIR378J-201ENST00000611988 109 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 MIR4275-201ENST00000636486 87 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NOD1Q9Y239 AC005005.4-201ENST00000623789 16698 ntBASIC5.7□□□□□ -1.5
NOD1Q9Y239 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.7□□□□□ -1.5
NOD1Q9Y239 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms