Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 AL670379.3-201ENST00000605040 251 ntBASIC6.06□□□□□ -1.44
LHX6Q9UPM6 MIR6820-201ENST00000611508 62 ntBASIC6.06□□□□□ -1.44
LHX6Q9UPM6 AC092628.2-201ENST00000622492 339 ntBASIC6.06□□□□□ -1.44
LHX6Q9UPM6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LHX6Q9UPM6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 ZNF402P-201ENST00000404435 3100 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 RNU5A-1-201ENST00000362698 116 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 snoU2_19.4-201ENST00000364329 80 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 MIR10A-201ENST00000385043 110 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AL663061.1-201ENST00000416625 580 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 SSXP9-201ENST00000417503 292 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AF186996.7-201ENST00000492781 209 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 BTF3L4P4-201ENST00000506381 449 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AC004980.4-201ENST00000513375 203 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 RNU6-772P-201ENST00000516042 105 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 RNU6-1095P-201ENST00000516148 108 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 RNA5SP206-201ENST00000516703 121 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 SNORA31.22-201ENST00000517204 135 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AL358913.1-201ENST00000554342 121 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 MIR6810-201ENST00000622701 70 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AL034408.1-202ENST00000636088 415 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 MIR6844-201ENST00000637122 62 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AL359195.2-201ENST00000623657 4412 ntBASIC6.05□□□□□ -1.44
LHX6Q9UPM6 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.05□□□□□ -1.44
LHX6Q9UPM6 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 RNA5SP132-201ENST00000364725 118 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 Y_RNA.319-201ENST00000365138 92 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 AL133270.1-201ENST00000402635 279 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 Y_RNA.595-201ENST00000410403 105 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 CYCSP32-201ENST00000440548 321 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 AL031737.1-201ENST00000450125 223 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 AC023818.1-201ENST00000498379 384 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 AC095057.1-201ENST00000507583 168 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 RNA5SP228-201ENST00000516232 133 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 MIR1269B-201ENST00000580405 75 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 SNORA74.4-201ENST00000607595 199 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 AP002826.1-201ENST00000608835 315 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 Mico1.1-201ENST00000611698 204 ntBASIC6.04□□□□□ -1.44
LHX6Q9UPM6 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX6Q9UPM6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.03□□□□□ -1.44
LHX6Q9UPM6 AC140479.2-201ENST00000421567 3130 ntBASIC6.03□□□□□ -1.44
LHX6Q9UPM6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LHX6Q9UPM6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LHX6Q9UPM6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms