Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC007435.1-201ENST00000421086 415 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 DUTP6-201ENST00000425573 462 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 VN1R10P-201ENST00000447106 875 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 USP9YP34-201ENST00000453983 808 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC096751.1-202ENST00000502691 1067 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC020699.1-201ENST00000505161 445 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC111000.2-201ENST00000507775 550 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 HIGD1AP13-201ENST00000509878 289 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC091826.1-201ENST00000514065 313 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 SNORA19.3-201ENST00000516165 130 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC087808.1-201ENST00000520501 361 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC021451.1-201ENST00000523498 1129 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC138915.2-201ENST00000569776 97 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AL022161.1-201ENST00000604390 213 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC008962.1-201ENST00000605729 304 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC009237.15-201ENST00000610252 501 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC131902.3-201ENST00000611767 581 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC005332.6-201ENST00000613178 446 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC023158.2-201ENST00000614876 543 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AC091925.2-201ENST00000625059 256 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 AL035425.3-201ENST00000564206 4996 ntBASIC3.41□□□□□ -1.86
CLIP2Q9UDT6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLIP2Q9UDT6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.4□□□□□ -1.86
CLIP2Q9UDT6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 RNU6-216P-201ENST00000363282 104 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 U3.42-201ENST00000408746 214 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 Z75741.2-201ENST00000417272 1167 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC092648.1-201ENST00000425870 423 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 SGO1P2-201ENST00000429458 1589 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 MTCO2P20-201ENST00000437339 673 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC093156.1-201ENST00000440382 670 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC092757.1-201ENST00000467293 467 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC104472.2-201ENST00000469035 601 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 KLHL2P1-201ENST00000508691 521 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC022690.1-201ENST00000526681 550 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC107016.2-201ENST00000547968 190 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 GTF3AP2-201ENST00000557014 266 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 LARP7P2-201ENST00000575306 125 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 BNIP3P24-201ENST00000593398 557 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC013444.2-201ENST00000603317 787 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AP002907.1-201ENST00000606361 1430 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC123767.1-202ENST00000620407 817 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 AC009487.2-201ENST00000420969 6821 ntBASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLIP2Q9UDT6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 SNORA9.2-201ENST00000365361 133 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 RNU6-878P-201ENST00000384578 110 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 CYCSP45-201ENST00000402289 315 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 MTCO2P21-201ENST00000419780 677 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AL139281.1-201ENST00000422120 335 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 MTCYBP34-201ENST00000439552 670 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 RPL21P2-201ENST00000440049 481 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 EXOSC3P1-201ENST00000448649 500 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AL590639.1-201ENST00000456484 337 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 RN7SL499P-201ENST00000481141 276 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC117522.2-201ENST00000510049 657 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 RN7SKP132-201ENST00000516001 208 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 OR4P1P-201ENST00000530808 1136 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms