Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 AC116618.1-201ENST00000634617 774 ntBASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CLCF1Q9UBD9 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 TAB3P1-202ENST00000452645 1634 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AL355596.1-201ENST00000565399 3996 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC013410.2-201ENST00000422627 201 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC084290.1-201ENST00000434995 374 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 HMGN2P20-201ENST00000437531 273 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC093156.1-201ENST00000440382 670 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 RN7SL633P-201ENST00000488974 297 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 HIGD1AP13-201ENST00000509878 289 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC091826.1-201ENST00000514065 313 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC103783.1-201ENST00000520506 373 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC245884.10-201ENST00000597355 337 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC006270.3-201ENST00000605967 1036 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AC004832.5-201ENST00000608677 401 ntBASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLCF1Q9UBD9 AL022578.1-201ENST00000439330 1433 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC108206.1-201ENST00000570186 4159 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 FAM35BP-202ENST00000497389 3337 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 FRG1BP-201ENST00000278882 761 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 SNORA46-201ENST00000384762 135 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 MIR135A2-201ENST00000384854 100 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 RPL23AP29-201ENST00000397284 453 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AL645937.1-202ENST00000421799 937 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 MTCYBP45-201ENST00000435243 565 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AL645638.1-201ENST00000440519 361 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 RAC1P7-201ENST00000445367 377 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC012181.1-201ENST00000479895 423 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 GTF2IP9-201ENST00000502460 301 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 VN1R104P-201ENST00000505115 1009 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC111000.2-201ENST00000507775 550 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AP001804.3-201ENST00000525146 880 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 NBEAP1-201ENST00000554452 979 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 CYCSP2-201ENST00000558168 301 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AP005205.1-201ENST00000563503 508 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AL049838.1-201ENST00000563647 981 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 OR4K8P-201ENST00000578842 1048 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 MIR4474-201ENST00000579189 78 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 COX6CP3-201ENST00000580869 223 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AL109653.1-201ENST00000603091 248 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC024153.1-201ENST00000603103 365 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AC245297.2-201ENST00000610119 565 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 AL445264.1-201ENST00000621719 171 ntBASIC2.59□□□□□ -1.99
CLCF1Q9UBD9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
CLCF1Q9UBD9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CLCF1Q9UBD9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
CLCF1Q9UBD9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RNU6-952P-201ENST00000391164 108 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 U3.42-201ENST00000408746 214 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RNU2-43P-201ENST00000410306 190 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RN7SKP123-201ENST00000410732 291 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC245054.2-201ENST00000415639 319 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 CCDC58P2-201ENST00000417131 366 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms